DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and Kifc1

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001182227.1 Gene:Kifc1 / 100502766 MGIID:109596 Length:674 Species:Mus musculus


Alignment Length:680 Identity:237/680 - (34%)
Similarity:343/680 - (50%) Gaps:114/680 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 RRGGGARAASPEPMK-----LGHRAKLRRSRS----ACDINELRGNKRTAAAPSLPSIPSKVSRL 125
            :||......:.||.|     :|...|:..||.    ...:::.:|:......|.... |...|.:
Mouse    38 KRGPDQMEDALEPAKKRTRVMGAVTKVDTSRPRGPLLSTVSQTQGHTAAQKGPKKTG-PRGCSAI 101

  Fly   126 GGALTVSSQRLVRPAAPSSITATAVKRPPVTRPAPRAAGGAAAKKPAGTGAAASSGAAAAAPKRI 190
            |..|  .||:.| ||||:        :.|.|..||...|..|.|:||                  
Mouse   102 GTVL--RSQKPV-PAAPA--------QKPGTSTAPVVVGKRAGKRPA------------------ 137

  Fly   191 APYDFKARFHDLLEKHKVLKTKYEKQTEDMGELES--MPQQLEETQNKLI-------ETESSLKN 246
              :|.|.:..||.|:.|    :|.::|:.: |||:  :.:||.|.|.:..       ..|..|.:
Mouse   138 --WDLKGQLCDLNEELK----RYREKTQTL-ELENRGLREQLREVQEQATTLGTERNTLEGELAS 195

  Fly   247 TQSDNECLQRQVKQHTAKIETITSTLGRTKEELSELQAIHEKVKTEHAALST------------- 298
            .:|..|..|::::..:|::..:...||..:..|.|||....:::.|.:.|||             
Mouse   196 VRSRAEQDQQRLETLSARVLELEECLGTRERLLQELQGERLQLQEERSTLSTQLEEQERRFQATE 260

  Fly   299 --------EVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRI 355
                    |||.|||:||..:....:|.       ::|:...|||:.|||.:.:|:||||||||:
Mouse   261 AALSSSQEEVVCLRQKTEAQVTLLAEQG-------DRLYGLEMERRRLHNQLQELKGNIRVFCRV 318

  Fly   356 RPPLESEENRMCCTWTY-------HDEST-VELQSIDAQAKSKMG------QQIFSFDQVFHPLS 406
            ||.||.|.........:       .|..| :.|...|.:..:..|      :..||||:||.|.|
Mouse   319 RPVLEGESTPSPGFLVFPPGPAGPSDPPTGLSLSRSDDRRSTLTGAPAPTVRHDFSFDRVFPPGS 383

  Fly   407 SQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMD----GVPESVGVIPRTVDLLFDSIRG 467
            .|.::||.::.|:|||||||.:|||||||||||||:||:    |.|:..|:|||.:..||...:.
Mouse   384 KQEEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPRGDPQLEGLIPRAMRHLFSVAQE 448

  Fly   468 YRNLGWEYEIKATFLEIYNEVLYDLLSNEQK-----DMEIRMAKNNKNDIYVSNITEETVLDPNH 527
            ....||.|...|:::|||||.:.|||:...:     :.|||.|.....::.|:|.....|.....
Mouse   449 MSGQGWTYSFVASYVEIYNETVRDLLATGPRKGQGGECEIRRASPGSEELTVTNARYVPVSCEKE 513

  Fly   528 LRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSE------- 585
            :..|:|.|..|||.|.||.|:||||||:|.:|::.|.||.:.......:|||||||||       
Mouse   514 VEALLHLAHQNRAVAHTAQNKRSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLH 578

  Fly   586 -SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSP 649
             .|....|:.||:.||.|||.|..||:||..|:.|:||||||||:||..||||::|.|||:|:||
Mouse   579 LGPGERDRLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISP 643

  Fly   650 FQDCFQESVKSLRFAASVNSCKMTKAKRNR 679
            .::...||:.|||||:.||.|.:..|:.|:
Mouse   644 LEENVSESLNSLRFASKVNQCVIGTAQANK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 156/356 (44%)
KISc 348..678 CDD:214526 156/360 (43%)
Kifc1NP_001182227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..96 4/30 (13%)
Lebercilin 146..306 CDD:292252 45/171 (26%)
SYCE1 171..300 CDD:291886 33/135 (24%)
KISc_C_terminal 309..666 CDD:276817 156/356 (44%)
KISc 311..667 CDD:214526 155/355 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..366 5/38 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I2153
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H83229
Inparanoid 1 1.050 319 1.000 Inparanoid score I2513
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181609at33208
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 1 1.000 - - otm43808
orthoMCL 1 0.900 - - OOG6_101893
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1242
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.730

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