DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and LOC100490298

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_012815398.1 Gene:LOC100490298 / 100490298 -ID:- Length:764 Species:Xenopus tropicalis


Alignment Length:510 Identity:178/510 - (34%)
Similarity:257/510 - (50%) Gaps:50/510 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 DFKARF--HDLLEKHKV---LKTKYEKQTEDMGELESMPQQLEETQNKLIE----TESSLKNTQS 249
            :|:..|  .|:.|..|:   |..|.:.|..::..|:...|.|||.:.|||:    ....|...|:
 Frog   264 NFEQMFLHRDIQENKKIIENLNKKLQSQDRELVNLQLKCQYLEEEKGKLIDRAENMSKKLAELQA 328

  Fly   250 DNECLQRQV----KQHTAKIETITSTLGRTKEE-LSELQAIHE--------KVKTEHA--ALSTE 299
            ::|..|::.    |..|.......:.|...||. |:.||...|        :|.|::|  .:..:
 Frog   329 EHEIHQQEAARAGKSQTQSESKEKAVLPLKKEALLNILQESRELNVCNNQLRVVTKNALSEIGLQ 393

  Fly   300 VVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEEN 364
            :.||:..||.:.|.|:    |:|..:....:..:|||.|:|.:.:||||||||||.|    .::|
 Frog   394 LRHLQNTTENMNRSNK----EVEEIRALYQRECLERKMLYNQLQELRGNIRVFCRCR----RDDN 450

  Fly   365 RMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNIC 429
            :        .:....|...|....:...::.|.|||||.|..||.|:||...|:|:|.:||||:|
 Frog   451 K--------GDHLEFLSGEDILINNNGNKKKFRFDQVFLPQCSQEDVFEGTLPIIKSCVDGYNVC 507

  Fly   430 IFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLL- 493
            |.|||||||||||||.|..:..||..|:|..|....:...|:  .|..|.:.||||||.|.||| 
 Frog   508 ILAYGQTGSGKTYTMMGPEQKPGVNIRSVKELIRICQERENI--RYTTKISMLEIYNETLRDLLV 570

  Fly   494 SNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTK 558
            .|....:|||   :....:.|..:.|..|.....:|..:...:.||..|||..|..|||||.:..
 Frog   571 QNGNTQLEIR---SQGKMVTVPGLKEIEVQTEEDIRKTISLGEKNRTVASTKMNTESSRSHLMVI 632

  Fly   559 LELIGRHAEKQEISVGSINLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILALLQKQDH 619
            |.:.|..:....:|..::.|.||||||    :..|..|:.|...||:||:.|..|..||.....|
 Frog   633 LHINGVDSISGVVSTATLTLCDLAGSERISKTEATGQRLMEAAAINKSLTALGQVFTALKNNSLH 697

  Fly   620 IPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTK 674
            :|||||||||||.|||.|.:|..:|:|:||......|::.:|:|.:|:....:.|
 Frog   698 VPYRNSKLTHLLQPSLSGQAKACVFVNISPDIKDIGETISTLQFGSSIQQIALGK 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 131/330 (40%)
KISc 348..678 CDD:214526 130/332 (39%)
LOC100490298XP_012815398.1 SMC_prok_B <214..>439 CDD:274008 48/178 (27%)
Motor_domain 436..750 CDD:354959 131/330 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181609at33208
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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