DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and kifc2

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_002941548.2 Gene:kifc2 / 100485082 XenbaseID:XB-GENE-995645 Length:924 Species:Xenopus tropicalis


Alignment Length:525 Identity:176/525 - (33%)
Similarity:286/525 - (54%) Gaps:59/525 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 EKHKVLKTKYE-------------KQTEDMG-----ELESMPQQLEETQNKLIETESSLKNTQSD 250
            |:::||.::..             |::||:.     ::.|...::|:.:::|:|....|::.:.:
 Frog   417 ERNRVLLSQISCQGEKCQKLEDRLKESEDLTTNLRVKISSYETEIEKLKHELMEEIHHLESQKEE 481

  Fly   251 -----NECLQRQVKQHTAKIETITSTLGRTKEELSELQAIHEKVKTEHAALSTEVVHLRQRTEEL 310
                 :||.:    ||   ::.:...|...:..|:.||.:.:.:||.:.:|.::|.:..|..|..
 Frog   482 AIKEASECSE----QH---LDHLKEQLAGVQSRLASLQPLLKNMKTNYNSLRSQVKNFSQFYEMS 539

  Fly   311 LRCNEQQAAEL-----ETCKEQLFQSNME---RKELHNTVMDLRGNIRVFCRIRPPLESEENRMC 367
            :|..::|....     |:.|:.|.:...|   ||..||.:::|:|||||.||:||...:.|....
 Frog   540 IREAKKQICSAITDVSESNKDLLAKYQREVQLRKRYHNQLVELKGNIRVLCRVRPHSHNNEEEGS 604

  Fly   368 CTWTYHDESTVELQ-----SIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYN 427
            .|    ...|:::.     |:..:.|.|.    |..|:||.|.:.|.::|:.:.|::.|.::|||
 Frog   605 LT----SPITIDMNDDTRLSVFYKGKEKN----FELDKVFVPQAKQEEVFQEIEPMVMSCINGYN 661

  Fly   428 ICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDL 492
            :||||||||||||||||:|..|:.|:..|.:..|:..:...:.| |.|.:..:.:||||||:.||
 Frog   662 VCIFAYGQTGSGKTYTMEGTLENPGINQRAMQALYKEMEARKGL-WHYTVSLSMVEIYNEVIRDL 725

  Fly   493 LSNE-QKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAV 556
            ||.: |:.::|::..:....::|..:|...|....|::.|:...|.||||..|..|||||||||:
 Frog   726 LSKDPQEKLDIKLNPDGSGQLHVPGLTSTEVNSFRHIKKLLTLGKKNRATFCTNMNERSSRSHAL 790

  Fly   557 TKLELIGRHAEKQEISVGSINLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILALLQKQ 617
            ..:.:.|:......::.|.:|||||||||    |.....|:.|.:|||:||..|..||.||..||
 Frog   791 LTINISGKDLTTGTVTTGKLNLVDLAGSERVCKSGAEGERLKEAQNINKSLLALGEVIQALRAKQ 855

  Fly   618 DHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLN 682
            .|||:||||||:||..|||..:||:|.:.|||.:....|:|.||:||..|  ||:.....:|.::
 Frog   856 GHIPFRNSKLTYLLQDSLGKGNKTVMMVQVSPSEGNVGETVCSLKFAQRV--CKVELGPASRRID 918

  Fly   683 NSVAN 687
            ....|
 Frog   919 PGSIN 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 137/335 (41%)
KISc 348..678 CDD:214526 137/339 (40%)
kifc2XP_002941548.2 SMC_prok_B 230..>535 CDD:274008 23/124 (19%)
KISc_C_terminal 583..910 CDD:276817 138/337 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181609at33208
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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