DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drice and casp6b.1

DIOPT Version :9

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_005164109.1 Gene:casp6b.1 / 791531 ZFINID:ZDB-GENE-041010-48 Length:279 Species:Danio rerio


Alignment Length:253 Identity:101/253 - (39%)
Similarity:143/253 - (56%) Gaps:13/253 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EYNMRHKNRGMALIFNHEHFEVPT-LKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTI 148
            ||:|||..||||||||.:.|:... ||:|.||:.|.::|....::|:|||..|.|....|:|..|
Zfish    28 EYDMRHARRGMALIFNQKQFDWKLGLKTRNGTDKDRDDLVSRFQELNFEVKAYNDYSRDDVLLKI 92

  Fly   149 EYAASQNHSDSDCILVAILSHGEMGYIYAKDTQYKLDNIWSFFTANHCPSLAGKPKLFFIQACQG 213
            :.|::.:|.|:||.:...|||||.|::||.|.:.::..|...|..:.|.||.||||:|..|||:|
Zfish    93 QEASAADHVDADCFVCIFLSHGEDGHVYANDKKIEIPEITDLFKGDKCRSLVGKPKIFIWQACRG 157

  Fly   214 DRLDGGVT-MQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRNTTRGSWFMQSLCAELAA 277
            |:||..|| |.....|...|:.:.|.:|..|||::.|||..||.|:|....|||::|.||..|..
Zfish   158 DKLDDAVTEMSVEDVEMAVDAGVLYTLPAGADFIMCYSTAEGFCSFREPLNGSWYIQDLCEILGR 222

  Fly   278 NGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQ-----QKQIPCITTMLTRILRFSD 330
            ....|....:||.|..:|::      ...|....     :||:||..:|||:.|.|.|
Zfish   223 YHSELQFTDILTLVNMKVSL------RSVPNCRNRAAIGKKQMPCFASMLTKRLFFRD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 99/250 (40%)
casp6b.1XP_005164109.1 CASc 29..272 CDD:237997 98/248 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D417543at33208
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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