DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drice and Casp2

DIOPT Version :9

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_038964243.1 Gene:Casp2 / 64314 RGDID:69274 Length:470 Species:Rattus norvegicus


Alignment Length:296 Identity:84/296 - (28%)
Similarity:134/296 - (45%) Gaps:39/296 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LANGYSSPSSSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFNHEHFE-VPTLKSRAGTNVDCENL 122
            |.||...|....:....:.....:...|.::.:.||:||:.::.||. ...|:.|:|.:||...|
  Rat   165 LDNGDGPPCLQVKPCTPEFYQAHYQLAYRLQSQPRGLALVMSNVHFTGEKDLEFRSGGDVDHTTL 229

  Fly   123 TRVLKQLDFEVTVYKDCR--------YKDILRTIEYAASQN-------------HSDSDCILVAI 166
            ..:.|.|.:.|.|..|..        |..|.:  :|...|.             |..:|..:||:
  Rat   230 VTLFKLLGYNVHVLYDQTAQFHRFQLYSGIYK--KYPKGQEMQEKLQNFAQLPAHRVTDSCIVAL 292

  Fly   167 LSHGEMGYIYAKDTQ-YKLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQT--- 227
            ||||..|.||..|.: .:|..::..|...:||||..|||:||||||:||..|.||..|..:.   
  Rat   293 LSHGVEGGIYGVDGKLLQLQEVFRLFDNANCPSLQNKPKMFFIQACRGDETDRGVDQQDGKNHAQ 357

  Fly   228 -----ETDG--DSSMSYKIPVHADFLIAYSTVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDIL 285
                 |:|.  :..|..::|..:|.:..|:.:.|..:.|||.||||::::|....:.....:.:.
  Rat   358 SPGCEESDAGKEELMKMRLPTRSDMICGYACLKGNAAMRNTKRGSWYIEALTQVFSERACDMHVA 422

  Fly   286 TLLTFVCQRVAVDFESCTPDTPEMHQQKQIP--CIT 319
            .:|..| ..:..:.|...|.| |.|:.|::.  |.|
  Rat   423 DMLVKV-NALIKEREGYAPGT-EFHRCKEMSEYCST 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 80/269 (30%)
Casp2XP_038964243.1 CARD_CASP2 32..118 CDD:260040
CASc 192..465 CDD:214521 80/269 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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