DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drice and Strica

DIOPT Version :10

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_610193.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster


Alignment Length:340 Identity:100/340 - (29%)
Similarity:143/340 - (42%) Gaps:71/340 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VGNPEQPNDHTDALGSVGSG-------------------GAGSSGLVAGSSHPYGSGAIGQLANG 62
            :.:|.:|:....::.|:...                   ..||||   |:.....:.|..|.|.|
  Fly   231 ITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSSG---GTKPKVTAVAQSQDAQG 292

  Fly    63 YSSPS-----SSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFNHEHFEVPTLKSRAGTNVDCENL 122
            ..|.|     ||..||..|     .|..|           |||||.|:... :.|.|:..|.:.|
  Fly   293 TISTSLGISKSSLTKNKLK-----PARVY-----------IFNHERFDNKN-EFRKGSAQDVKVL 340

  Fly   123 TRVLKQLDFEVTVYKDCRYKDILRTIEYAASQNHSDSDCILVAILSHG-EMGYIYAKDTQYKLDN 186
            ....:||..:|.|..|.....|.:|:....:::..|...:::.||||| ....|.|||..|.||:
  Fly   341 RATFEQLKCKVEVITDATLVTIKKTVRMLQTKDFEDKSALVLVILSHGTRHDQIAAKDDDYSLDD 405

  Fly   187 IWSF-FTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYS 250
            ...| ...|.  :|..||||.|:|||:||...||.....:|  .:|..:         :.|..||
  Fly   406 DVVFPILRNR--TLKDKPKLIFVQACKGDCQLGGFMTDAAQ--PNGSPN---------EILKCYS 457

  Fly   251 TVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQI 315
            |..||.|:| |..|:.|:|:||..|..:||..||.|::..|  |..|..:|         :.:||
  Fly   458 TYEGFVSFR-TEDGTPFIQTLCEALNRSGKTSDIDTIMMNV--RQVVKMQS---------KDRQI 510

  Fly   316 PCITTMLTRILRFSD 330
            |.:|:.||....|.|
  Fly   511 PSVTSTLTSKYVFGD 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 79/245 (32%)
StricaNP_610193.1 CASc 311..523 CDD:444667 80/253 (32%)

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