DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drice and ced-3

DIOPT Version :9

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001255708.1 Gene:ced-3 / 178272 WormBaseID:WBGene00000417 Length:503 Species:Caenorhabditis elegans


Alignment Length:375 Identity:113/375 - (30%)
Similarity:167/375 - (44%) Gaps:81/375 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HTDALGSVGS------------GGAGSSGLVAGSSHPYGSGAIGQL------AN---------GY 63
            |.|::.||.|            ..:.|..|.:...|.|.|..:...      ||         ||
 Worm   129 HRDSVSSVSSFTSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFTGCSSLGY 193

  Fly    64 SSP-SSSYRK--------------NVAKMVTDRHAAEYNMRHKN----RGMALIFNHEHFE-VPT 108
            ||. :.|:.|              |.....|.....:....::|    |||.||.|:|||| :||
 Worm   194 SSSRNRSFSKASGPTQYIFHEEDMNFVDAPTISRVFDEKTMYRNFSSPRGMCLIINNEHFEQMPT 258

  Fly   109 LKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTI-EYAASQNHSDSDCILVAILSHGEM 172
               |.||..|.:|||.:.:.:.:.|....:...:.:|.|| ::|..::|.|| .||| ||||||.
 Worm   259 ---RNGTKADKDNLTNLFRCMGYTVICKDNLTGRGMLLTIRDFAKHESHGDS-AILV-ILSHGEE 318

  Fly   173 GYIY-AKDTQYKLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGG-----------VTMQRS 225
            ..|. ..|.......|:....|.:.|.||.|||:.|:|||:|:|.|.|           ..::|.
 Worm   319 NVIIGVDDIPISTHEIYDLLNAANAPRLANKPKIVFVQACRGERRDNGFPVLDSVDGVPAFLRRG 383

  Fly   226 QTETDGD------------SSMSYKIPVHADFLIAYSTVPGFYSWRNTTRGSWFMQSLCAELAAN 278
            ....||.            ..:..|.|..||.||||:|...:.||||:.|||||:|::|...:.:
 Worm   384 WDNRDGPLFNFLGCVRPQVQQVWRKKPSQADILIAYATTAQYVSWRNSARGSWFIQAVCEVFSTH 448

  Fly   279 GKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPCITTMLTRILRF 328
            .|.:|::.|||.|.::||..|::    :...:..||:|.:|:.|.:...|
 Worm   449 AKDMDVVELLTEVNKKVACGFQT----SQGSNILKQMPEMTSRLLKKFYF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 93/273 (34%)
ced-3NP_001255708.1 CARD 2..90 CDD:128424
CASc 235..496 CDD:214521 93/269 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162595
Domainoid 1 1.000 130 1.000 Domainoid score I3239
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 132 1.000 Inparanoid score I3180
Isobase 1 0.950 - 0 Normalized mean entropy S5027
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 1 1.000 - - mtm4766
orthoMCL 1 0.900 - - OOG6_103710
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3066
SonicParanoid 1 1.000 - - X460
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.770

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