DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drice and csp-1

DIOPT Version :10

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001022452.1 Gene:csp-1 / 175007 WormBaseID:WBGene00000819 Length:536 Species:Caenorhabditis elegans


Alignment Length:290 Identity:83/290 - (28%)
Similarity:140/290 - (48%) Gaps:42/290 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 YSSPSSSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLK 127
            |.|.|...|.: ||....:|...|.|....||..||.::|:|:  .::.|.||..|..|||::.:
 Worm   263 YDSQSRMPRTD-AKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQ 324

  Fly   128 QLDFEVTVYKDCRYKDILRTIEYAASQNHSDSDCILVAILSHGE-MGYIYAKDTQYKLDNIW--S 189
            :|.:.|...::...:.:|..|:..|...|:||  |::.:||||: .|.::..|....  |:.  |
 Worm   325 KLQYTVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDDMPV--NVMEVS 385

  Fly   190 FFTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDG---------------DSSMSYKI 239
            .:.|.| .:|..|||...:.||:|.:|:.||.:       ||               :..||..:
 Worm   386 TYLAYH-QNLLLKPKWVAVSACRGGKLNMGVPV-------DGLPALEDKCAPISKFWNLMMSRIM 442

  Fly   240 P-----VHADFLIAYSTVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDF 299
            |     ::||.:|::||..||.|:|:...|:|:::|:|.....:.|.:.:|.:||...:.|...:
 Worm   443 PGTFTSLNADVIISFSTTDGFTSYRDEEAGTWYIKSMCKVFNKHSKTMHLLDILTETGRNVVTKY 507

  Fly   300 ESCTPDTPEMHQQKQIPCITTMLTRILRFS 329
            |:...:.    ..||.|.|.:.||:...||
 Worm   508 ENVQGNV----VLKQAPEILSRLTKQWHFS 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 76/267 (28%)
csp-1NP_001022452.1 SPK 76..188 CDD:214732
CASc 285..533 CDD:214521 74/265 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.