DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drice and Casp4

DIOPT Version :10

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_031635.2 Gene:Casp4 / 12363 MGIID:107700 Length:373 Species:Mus musculus


Alignment Length:255 Identity:73/255 - (28%)
Similarity:116/255 - (45%) Gaps:49/255 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTI-EYAASQNHSDS 159
            |||..:..|:  .|..|.|.|.|...:..:|:.|.::|.|.::...:.:...: ::||...|..|
Mouse   134 ALIICNTEFK--HLSLRYGANFDIIGMKGLLEDLGYDVVVKEELTAEGMESEMKDFAALSEHQTS 196

  Fly   160 DCILVAILSHGEM----GYIYAKDT----QYKLDNIWSFFTANHCPSLAGKPKLFFIQACQG--- 213
            |...:.::|||.:    |.::::.|    ||  |.|:..|...|||.|..|||:..:|||:|   
Mouse   197 DSTFLVLMSHGTLHGICGTMHSEKTPDVLQY--DTIYQIFNNCHCPGLRDKPKVIIVQACRGGNS 259

  Fly   214 ----------DRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRNTTRGSWFM 268
                      .:|..||.:.|:. |.|. ..:|:   |..||:..|||.|...|:|:.|.||:|:
Mouse   260 GEMWIRESSKPQLCRGVDLPRNM-EADA-VKLSH---VEKDFIAFYSTTPHHLSYRDKTGGSYFI 319

  Fly   269 QSLCA---ELAANGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPCI-TTMLTR 324
            ..|.:   :.|.:....||..       :|...||..:     :|  .|:|.| ...|||
Mouse   320 TRLISCFRKHACSCHLFDIFL-------KVQQSFEKAS-----IH--SQMPTIDRATLTR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 73/255 (29%)
Casp4NP_031635.2 Required for LPS-binding. /evidence=ECO:0000269|PubMed:25119034 1..59
CARD_CASP1-like 5..85 CDD:260036
CASc 122..371 CDD:214521 73/255 (29%)
Blue background indicates that the domain is not in the aligned region.

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