DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drice and Casp4

DIOPT Version :10

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_446188.2 Gene:Casp4 / 114555 RGDID:621757 Length:373 Species:Rattus norvegicus


Alignment Length:255 Identity:73/255 - (28%)
Similarity:117/255 - (45%) Gaps:49/255 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTI-EYAASQNHSDS 159
            |||..:..|:  .|..|.|.|:|...:..:|::|.::|.|.::...:.:...: ::||...|..|
  Rat   134 ALIICNTEFK--HLSLRYGANIDISGMKGLLEELGYDVVVKEELTAEGMESEMKDFAALSEHQTS 196

  Fly   160 DCILVAILSHGEM----GYIYAKDTQYKL--DNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDG 218
            |...:.::|||.:    |.::::.|...|  |.|:..|...|||.|..|||:..:|||:|.. .|
  Rat   197 DSTFLVLMSHGTLQGLCGTMHSEATPDVLLYDTIYQIFNNCHCPGLRDKPKVIIVQACRGGN-PG 260

  Fly   219 GVTMQRSQTETDGDSSMSYK---IP------------VHADFLIAYSTVPGFYSWRNTTRGSWFM 268
            .|.::.|      ..:.||:   :|            |..||:..|||.|...|:|:.||||:|:
  Rat   261 EVWIRES------SGAHSYRAVDLPRNMEADAVRMSHVEKDFIALYSTTPHHLSYRDKTRGSYFI 319

  Fly   269 QSL--CAELAANGKRL-DILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPCI-TTMLTR 324
            ..|  |..:.|....| ||..       :|...||..:.::       |:|.| ...|||
  Rat   320 SKLISCFRIHACSCHLFDIFL-------KVQQSFEKASINS-------QMPTIDRATLTR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 73/255 (29%)
Casp4NP_446188.2 CARD_CASP1-like 5..85 CDD:260036
CASc 122..371 CDD:214521 73/255 (29%)
Blue background indicates that the domain is not in the aligned region.

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