DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drice and casp17

DIOPT Version :10

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_017213601.1 Gene:casp17 / 101886133 ZFINID:ZDB-GENE-190425-2 Length:276 Species:Danio rerio


Alignment Length:246 Identity:83/246 - (33%)
Similarity:128/246 - (52%) Gaps:24/246 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 NMRHKNRGMALIFNHEHFEVPT-LKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEY 150
            |.|.|||  |||.:.|:|.... |::|.|...|.:.|.::|.:|.|.|.:..|....:|:...:.
Zfish    12 NKRMKNR--ALIVSVENFYPDALLRNRPGAKKDTQRLHKILMKLGFSVDIRVDMEAGEIIEAFKQ 74

  Fly   151 AASQNHSDSDCILVAILSHGEMGYIYAKDTQ-YKLDNIWSFFTANHCPSLAGKPKLFFIQACQGD 214
            .:.|  :..:|.:..|.||||.|.::..|.: ..|..|:|.|.:   |.:..|.|||.||||:|.
Zfish    75 ESEQ--TVKECFVGIISSHGEEGVVFGCDGRAVNLAEIYSCFRS---PIMKDKSKLFLIQACRGG 134

  Fly   215 RLDGGVTMQRSQTETDGDSS-----MSYKIPVHADFLIAYSTVPGFYSWRNTTRGSWFMQSLCAE 274
            .|||||     |.|||..||     :|..:.:..|..:.|:|.||:.::.:.. ||..:|:||..
Zfish   135 DLDGGV-----QVETDSSSSEEQDILSELLSIPIDTAVTYATSPGYAAFMHPL-GSVLIQTLCDL 193

  Fly   275 LAAN-GKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPCITTMLTR 324
            |.:: |..|:|..|||.:..:||.:|::   ....:..:||:||..|..||
Zfish   194 LESDGGPDLEITKLLTRLNHQVAYNFQA---RGKILGGKKQMPCFVTRFTR 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 83/246 (34%)
casp17XP_017213601.1 CASc 18..244 CDD:444667 79/240 (33%)

Return to query results.
Submit another query.