DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drice and casp3.1

DIOPT Version :9

Sequence 1:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_031751294.1 Gene:casp3.1 / 100486222 XenbaseID:XB-GENE-5779643 Length:287 Species:Xenopus tropicalis


Alignment Length:266 Identity:93/266 - (34%)
Similarity:146/266 - (54%) Gaps:9/266 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SSSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFNHEHFE-VPTLKSRAGTNVDCENLTRVLKQLD 130
            :.|.:.||.....| ::..|.|.:|.:.:.||...|.|: .|..|....:|.|...|..:..::.
 Frog    26 AESLKMNVTPAKPD-NSMVYKMNYKQKSICLILCMEKFDNDPKGKRSRNSNDDKIFLNNIFVKMG 89

  Fly   131 FEVTVYKDCRYKDILRTIEYAASQNHSDSDCILVAILSHGEMGYIYAKDTQYKLDNIWSFFTANH 195
            |||.:.::....:|...:...|.|:||:..|.:..::|||:..:.||:|.::|:|.:...|...:
 Frog    90 FEVRLEENKTADEIESLLNDIARQDHSERGCFVCVVISHGDKDFFYARDQEFKIDALAEPFHGEN 154

  Fly   196 CPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRN 260
            |.||.|||||||||||:||:.|.||........|...     .||...|||.||:|.||:::||.
 Frog   155 CKSLIGKPKLFFIQACRGDKTDSGVVKDAGIATTTAS-----VIPTECDFLFAYATPPGYFAWRR 214

  Fly   261 TTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPCITTMLTRI 325
            .. ||||:||||..|....::.|:|.:||.|..:||.::.|.:.|| :.:::|::.|..:|||:.
 Frog   215 GA-GSWFIQSLCEMLGEYWQKRDLLQILTRVNHKVAYEYISNSTDT-DKNEKKEMTCFLSMLTKE 277

  Fly   326 LRFSDK 331
            |.|..|
 Frog   278 LYFFHK 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DriceNP_524551.2 CASc 86..330 CDD:214521 88/244 (36%)
casp3.1XP_031751294.1 CASc 43..281 CDD:237997 87/244 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D417543at33208
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 1 1.000 - - mtm9422
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.