DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rnb and armc5

DIOPT Version :9

Sequence 1:NP_651726.1 Gene:Rnb / 43513 FlyBaseID:FBgn0039696 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_021329768.1 Gene:armc5 / 569910 ZFINID:ZDB-GENE-030131-7382 Length:1218 Species:Danio rerio


Alignment Length:1031 Identity:195/1031 - (18%)
Similarity:343/1031 - (33%) Gaps:306/1031 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YKCLVKLRTDLVKDKNG-IVLFRTAGGVHIMVRLITK--LNEKIMEVVLSILGNCCTDEQSCIEA 86
            ::.||.:||..:|.... |..:::.||:..::.|:.:  .:.|.:::.||||.||||::.:.::.
Zfish    73 WRALVAIRTQHIKGGGSRIARYQSRGGIPPLLDLLRRPESSRKFVDLALSILANCCTEKGTRLQV 137

  Fly    87 VECKVIHPLVTILK-TIPNPLIQCRACRMLGNIAKSKKASQ-------------CLTV------- 130
            .:...:..:|.:|| .:....:|.||.|.|||:|...:.|.             ||:|       
Zfish   138 RKLDGVSVVVDVLKRNVSVETVQNRAARALGNLAMDPEGSSEVHSAGGVPLLLLCLSVSPPPPPS 202

  Fly   131 HYAAIAPAICHIIESTSAVQTRIMAFRVCRFLLASSQFLKYFLMANGFQQLMRIFLAVMKNEEAS 195
            ..:::.||..........||:...|.    ..|:.:...:..|::.|....:..|::        
Zfish   203 SPSSVTPASELCAPKVECVQSAARAL----VYLSDTPANRLLLLSQGALPALAQFIS-------- 255

  Fly   196 KEPVPDIEMSTLIGLKRNQHREKYFEEVARNLEGVRSDIFDHQMLKNSTRNCDYALPKENEAAVE 260
                |:..    .||:|...|                      .|...||.|          :.|
Zfish   256 ----PEYP----AGLQRASLR----------------------ALHELTRGC----------SAE 280

  Fly   261 LALEILKCLVLISAQQIGLKVWESISWNTSLASIVCFVKEDG-DQRASALKILSNFCKDPFAFYM 324
            .|.|:.:...|   .|:|:           |||     .||| .....|||.|:|.|..      
Zfish   281 CAREMSRSGAL---TQLGV-----------LAS-----GEDGRPLEELALKTLANMCSQ------ 320

  Fly   325 LSTADAIVAACEMLMAVNMAKPLSESESRHCI--NIILTLSTDACSRSKIRRCGALRKLVAMIRD 387
             .:...:|.:..::.  ..|:.:.:...|..:  ..:.....:|.:|:|::..|.|..|::.:..
Zfish   321 -GSLRPLVGSLGVIQ--KFAEEVKKDPLRSSVFFKALCLCCREAVNRAKVKESGGLEVLISFLSA 382

  Fly   388 SNSQSERSSLFHILYNFQYDNLSMELMLYEGLMPMLVRELNDYLTSDDEHHKRRRD--------- 443
            ..:.......|....:|.||..::|.:...||:|:|::.|.: |...:|.:..:.|         
Zfish   383 HQNHPLTRFAFLACVDFVYDESALEQLQELGLVPLLIKRLVE-LAQGEEPNTGKMDASLASSSPC 446

  Fly   444 -------------ERLQGGKKRKLTDPTTPETLSKFSKTHETLGSD---------FESPS----- 481
                         ..|:|.|:..::...|..: |.|......|.|:         .|.||     
Zfish   447 SELMSSCFNSFDFSALEGNKREDVSKDQTAGS-SSFLSLRSWLVSEGLISSEGELTECPSGPDVF 510

  Fly   482 -SSPRSYRTTSP----CSSRSM---------SPVCTDLLTN--------------DDDDNYSPAC 518
             .||:|..::||    |...|:         ||.....||.              ....:..|:|
Zfish   511 GGSPQSSVSSSPLLTHCPDLSLTPTLRPPHFSPSSRSKLTRPASSSAPVSPRNIPGSPSSTQPSC 575

  Fly   519 SDDDEDEDDSTNNSNLDT-----------RERRIAANRSQPSNVLDILKLIEEGS--------EP 564
            :...::|..|:......|           |:|..||:.|..|:...........|        .|
Zfish   576 TSTPQNEQPSSVTKPSTTPSSPPQISSPPRKRLRAASSSSSSSYTSFSSFSSSSSWSTVVSIETP 640

  Fly   565 IDDPLSDKEDL-------EELSSDVPPKL-------APFRNTTCNTIDIIENLIYRITLMVNKRV 615
               |:..|..:       |..:.:.|..|       ||..:|......:...|:|.:|       
Zfish   641 ---PMMSKPPIYNHPYHPEVWAPESPILLLLSRFSHAPDPSTALINTSVFSGLLYYLT------- 695

  Fly   616 ELGKPETLDTLIRAIKLFGSNNNFPNALTNILLESQFFAQIIKHGVVHQL--------------- 665
                 :..|...|..::.|..:..||.|          ..:::.|.|..:               
Zfish   696 -----QHHDPSGRCFRMLGRLSCNPNCL----------QALVRTGAVALIRQKLCVRGDEAGGTD 745

  Fly   666 YQFTKLK-EIRKDGFAFLETLTNVGESNYGKEELVRLLRCDDVISQQRAAISVAYIVKSHRLLYQ 729
            .|..|:| :|.:.|...|..|....||.:|...|..::.......:....:|:..:..:..||.:
Zfish   746 RQSEKVKGKITQLGLGLLSNLRVQSESGFGTGVLTHIMLSGSESDKLYCVLSLPLVNSNRVLLKK 810

  Fly   730 FLYDGNALNMLFDMMLRKKTEDHYADEAADAVTSMARYTLGIVMPEAEPAES------------- 781
            .|.|...|....: ::...:||  .|:..|..:...|..|...:|..|...|             
Zfish   811 LLLDSGGLAAALE-LIDYHSED--VDDNEDGQSDKCRTFLAGWLPPQEQVSSLRCKSLYASLLIG 872

  Fly   782 ---------------------TAGICNQIANDTAPLHAN--C-------DMRFLVGHGADSTSIG 816
                                 |.....||.::.:.|..|  |       ::.||:.   |.|.:.
Zfish   873 CLSSLLSAFKEDRKNCSTDCRTTTEATQILHNKSQLQQNQPCPYQKATHNLTFLLD---DGTLLK 934

  Fly   817 FNKQLLCDT-------SEVFNKMLNSDFREGHQGE---IQLPDYTASGLRYFLHLI 862
            .|.:.|...       ||.|..:|...|.|..:.:   ||:.|.....|...||.:
Zfish   935 ANHEALTGEEGDSGVGSEYFRALLMGGFGEAQKDKAEPIQIKDVKKGMLLPVLHYL 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnbNP_651726.1 ARM 44..147 CDD:237987 29/125 (23%)
armadillo repeat 49..78 CDD:293788 10/30 (33%)
armadillo repeat 84..118 CDD:293788 9/34 (26%)
BTB 801..904 CDD:197585 18/72 (25%)
armc5XP_021329768.1 armadillo repeat 98..129 CDD:293788 10/30 (33%)
armadillo repeat 136..170 CDD:293788 9/33 (27%)
armadillo repeat 177..232 CDD:293788 9/58 (16%)
armadillo repeat 238..273 CDD:293788 9/72 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581533
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28KHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D174815at2759
OrthoFinder 1 1.000 - - FOG0007945
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23312
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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