DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sro and TSC10B

DIOPT Version :9

Sequence 1:	NP_651725.1	Gene:	sro / 43512	FlyBaseID:	FBgn0262112	Length:	335	Species:	Drosophila melanogaster
Sequence 2:	NP_197421.1	Gene:	TSC10B / 832040	AraportID:	AT5G19200	Length:	331	Species:	Arabidopsis thaliana

Alignment Length:	209	Identity:	57/209 - (27%)
Similarity:	89/209 - (42%)	Gaps:	40/209 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 LKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKL------LQGLASAKDGL 79
            :.:..|| |.|||..||:|.::|               |...|||||:      .:.||.||..:
plant    33 IPIKFRH-VFITGGSSGIGLALA---------------HRAVSEGAKVSILARSTEKLAEAKRSI 81

  Fly    80 S-----RMHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEA 139
            .     .:.|...|:.:.|::.         .|.|.|..:..||.|.||....|.|.|..|:::.
plant    82 QLATGVEVATFSADVRDYDAVS---------KAIDESGPIDVLIVNQGVFIGKELEKQSPEEVKF 137

  Fly   140 QINCNLLGTMRLTHELLPLLRQQQGR----IINVTSHCGLQALPALGPYAASKAALRFWTDSLRV 200
            .|:.||.|:..:....||.::.::||    |..|:|..|...:.....|:|||..|:....:|:.
plant   138 MIDVNLTGSFNVIKAALPAMKAREGRGPASISLVSSQAGQAGIYGYTAYSASKFGLQGLAQALQQ 202

  Fly   201 ELQQYGMEVVNFIP 214
            |:...|:.|....|
plant   203 EVISDGIHVTLLFP 216

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sro	NP_651725.1	17beta-HSD-like_SDR_c	27..300	CDD:187632	56/203 (28%)
sro	NP_651725.1	adh_short	28..229	CDD:278532	55/202 (27%)
TSC10B	NP_197421.1	KDSR-like_SDR_c	38..271	CDD:187643	57/204 (28%)
TSC10B	NP_197421.1	adh_short	38..222	CDD:278532	57/204 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910