DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Hsd17b2

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_077367.2 Gene:Hsd17b2 / 79243 RGDID:621803 Length:381 Species:Rattus norvegicus


Alignment Length:310 Identity:85/310 - (27%)
Similarity:146/310 - (47%) Gaps:39/310 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMHTL 85
            |.||.: .||:||.|||.||::|.:. :.|..||.:...:.:..||:.|:     |:...|:..|
  Rat    79 LPVDQK-AVLVTGADSGFGHALAKHL-DKLGFTVFAGVLDKEGPGAEELR-----KNCSERLSVL 136

  Fly    86 ELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQI-------NC 143
            ::|:.:|:.|:.||.::.:   |.....|.|::|||||:.|         .|:.::       .|
  Rat   137 QMDVTKPEQIKDVHSEVAE---KIQDKGLWAVVNNAGVLHF---------PIDGELIPMTVYRKC 189

  Fly   144 ---NLLGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQY 205
               |..|.:.:|...|||||:.:||::||:|...:.....:..||::|||:..::..:|.||.::
  Rat   190 MAVNFFGAVEVTKVFLPLLRKSKGRLVNVSSMGAMIPFQMMAAYASTKAAISMFSAVIRQELAKW 254

  Fly   206 GMEVVNFIPGSFVLDSNIAARQQQHAQKMREA---FSAEQHALY-DTYFEAFNGYLKVLSGFKPP 266
            |::||...||.|  .:||...|....:..:|.   ||.|....| ..|.......|.|:.....|
  Rat   255 GVKVVTIHPGGF--QTNIVGSQDSWDKMEKEILDHFSKEIQENYGQEYVHTQKLALPVMREMSNP 317

  Fly   267 NRLRNESLLAKFKDALTSSQPLALYIEEPRRYRLYRWLFTLCPTPLVDWL 316
            :   ...:|...:.|:.:....:.|......| |:.......|..|:|::
  Rat   318 D---ITPVLRDIQHAICAKNHSSFYCSGRMTY-LWICFAAYSPISLLDYI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 78/286 (27%)
adh_short 28..229 CDD:278532 65/210 (31%)
Hsd17b2NP_077367.2 type2_17beta_HSD-like_SDR_c 84..364 CDD:187665 82/305 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 1 1.000 - - otm45084
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.880

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