DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Bdh1

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_780386.3 Gene:Bdh1 / 71911 MGIID:1919161 Length:343 Species:Mus musculus


Alignment Length:301 Identity:92/301 - (30%)
Similarity:139/301 - (46%) Gaps:41/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSE-GAKLLQGLASAKDGLSRMH 83
            |....|...:||||||||.|.|:|.:.|....:....|....|.: |.|.|..|.|     .|:.
Mouse    49 QADAASGKAILITGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGDAGVKELDSLKS-----DRLR 108

  Fly    84 TLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGT 148
            |::|::...:.:......:|..| |||...:..|:||||:..|||.|:...|..:.....||.||
Mouse   109 TIQLNVCNSEEVEKAVETIRSGL-KDPEKGMWGLVNNAGISTFGEVEFTSMETYKEVAEVNLWGT 172

  Fly   149 MRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFI 213
            :|.|...|||||:.:||::|::|..|..|.||..||..:|..:..::|.||.|:...|::|....
Mouse   173 VRTTKSFLPLLRRAKGRVVNISSMLGRMANPARSPYCITKFGIEAFSDCLRYEMHPLGVKVSVVE 237

  Fly   214 PGSFVLDSNIAA--RQQQHAQKM-------------REAFSAEQHALYDTYFEAFNGYLKVLSGF 263
            ||:|:..:::.:  |.|..|:||             |:.|. |:.|..:||..:           
Mouse   238 PGNFIAATSLYSPERIQAIAKKMWDDLPEVVRKDYGRKYFD-EKIAKMETYCNS----------- 290

  Fly   264 KPPNRLRNESLLAKFKDALTSSQPLALYIEEPRRYRLYRWL 304
               ......|::.....|||::.|...|  .|..|  |.||
Mouse   291 ---GSTDTSSVINAVTHALTAATPYTRY--HPMDY--YWWL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 87/288 (30%)
Bdh1NP_780386.3 type2_17beta_HSD-like_SDR_c 56..341 CDD:187665 90/294 (31%)

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