DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and zgc:109982

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001018379.1 Gene:zgc:109982 / 553564 ZFINID:ZDB-GENE-050522-139 Length:318 Species:Danio rerio


Alignment Length:274 Identity:74/274 - (27%)
Similarity:124/274 - (45%) Gaps:40/274 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SRHVVLITGCDSGLGHSMAVYC--HESLHMTVISCCHN-IKSEGAKLLQGLASAKDGLSRMHTLE 86
            ::.|||||||.||:|.|:||..  .|.....|.:...| .|:|..|...|....:       |||
Zfish     2 NQKVVLITGCSSGIGLSLAVRIANDEKKRFMVYATMRNTAKAEALKEAAGQTLGQ-------TLE 59

  Fly    87 ---LDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGT 148
               ||:.:.:|||.....|       |..::..||:||||...|..|.|..|::::.::.|..|.
Zfish    60 IKQLDVCDENSIRACVDSL-------PMGKIDILISNAGVGMIGPVECQTIEEMKSVMDTNFFGL 117

  Fly   149 MRLTHELLP-LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNF 212
            :||...:|| :.|::.|.|:.::|..|:|.:.....|||||.|:..:.:||.|:..::.:.:...
Zfish   118 VRLLKVVLPDMKRRKSGHIVVISSIMGIQGILFNDIYAASKFAVEGFCESLAVQAMRFNLNISLI 182

  Fly   213 IPGSFVLDSNIAARQQQHAQKM---------REAFSAEQHALYDTYFEAF--------NGYLKVL 260
            .||..:  :....:..:...|:         .:.|:......||..|::|        ....|::
Zfish   183 EPGPVI--TEFERKVYEEGMKIDLSKVDKVTADMFTNTCLKNYDQMFKSFGQTPEDIAEHAFKMI 245

  Fly   261 SGFKPPNRLRNESL 274
            :...||.|.:...|
Zfish   246 TMENPPFRHKTNGL 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 74/272 (27%)
adh_short 28..229 CDD:278532 63/207 (30%)
zgc:109982NP_001018379.1 NADB_Rossmann 4..261 CDD:304358 74/272 (27%)
adh_short 4..198 CDD:278532 63/209 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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