DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and dhrs7b

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_021326304.1 Gene:dhrs7b / 550454 ZFINID:ZDB-GENE-050417-277 Length:316 Species:Danio rerio


Alignment Length:238 Identity:66/238 - (27%)
Similarity:104/238 - (43%) Gaps:37/238 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QLLRALRRSLGLGRQQ-----------LKVDSR---------HVVLITGCDSGLGHSMAVYCHES 49
            |.||.:.|:||:|...           |||..|         .||:|||..||||...|...|.:
Zfish     3 QSLRHMERALGVGIGPLAAGTVGLLILLKVIQRLRRRPNIQDKVVVITGASSGLGKECARVFHAA 67

  Fly    50 LHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMH---TLELDLLEPDSIRLVHRQLRDILAKDPS 111
            ....::  |...:....::::.|.:...|.::.:   |:..||   .:..:|.....:||.... 
Zfish    68 GARLIL--CGRDQRRLQEVVEELRNKTYGKTQTYTPCTVTFDL---SNTSVVCSAAAEILKCHG- 126

  Fly   112 YRLTALINNAGVMCFGEFEWQLTEQIEAQ---INCNLLGTMRLTHELLP-LLRQQQGRIINVTSH 172
             .:..|||||||...|..   |...:..|   :..|..|.:.||..:|| ::.:..|.|:.::|.
Zfish   127 -HIDVLINNAGVSYRGNI---LDTHVSVQREVMETNYFGPVALTQAILPSMVDRGSGHIVVISSV 187

  Fly   173 CGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIPG 215
            .|..::|....|||||.|::.:.|.||.|:...|:.|....||
Zfish   188 QGKISIPYRSAYAASKHAMQAYYDCLRAEVDSLGLHVSVLSPG 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 55/196 (28%)
adh_short 28..229 CDD:278532 55/195 (28%)
dhrs7bXP_021326304.1 11beta-HSD1_like_SDR_c 42..303 CDD:187593 55/199 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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