DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and zgc:113142

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001012506.1 Gene:zgc:113142 / 503524 ZFINID:ZDB-GENE-050220-2 Length:359 Species:Danio rerio


Alignment Length:342 Identity:100/342 - (29%)
Similarity:147/342 - (42%) Gaps:79/342 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LRALRRSL--GLGRQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLL 69
            ||.....|  |.||         .|||||||||.|:.:|... :.:..||.:.|...:..||:.|
Zfish    39 LRQTEEGLWDGFGR---------AVLITGCDSGFGYHLAKKL-DLMGFTVFAGCLCPEGPGARSL 93

  Fly    70 QGLASAKDGLSRMHTLELDLLEPDSIRLVHRQLRDIL-AKDPSYRLTALINNAGVMCFGEFEWQL 133
                 .::...|:..|:||:...:.|    ...:|.: |..|...|.|::||||:..:||.||..
Zfish    94 -----VEESSKRVKILQLDVTNEEHI----SSAKDFVEANLPVKGLYAVVNNAGISDWGETEWST 149

  Fly   134 TEQIEAQINCNLLGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSL 198
            .|..:...:.||.|.:|:|...|||:|..:||::.|:|.........:|.|:.||..|..:.|.|
Zfish   150 AEDFQKMADVNLFGAIRVTIPFLPLVRASKGRMLYVSSIFAFFNCLNMGAYSVSKRGLEAFADCL 214

  Fly   199 RVELQQYGMEVVNFIPGSFVLDSNIA--------------ARQQQHAQK-MREAFSAEQHALYDT 248
            |:|:..:|::|....||:|...:||.              .|:|...|| :.||..         
Zfish   215 RIEMAGFGVKVSIIQPGNFGAATNILHKKTPKDIWAEFDDVRKQTFNQKYIEEACE--------- 270

  Fly   249 YFEAFNGYLKVLSGFKPPNRLRNESLLAKFKDALTSSQPLALYIEEPRRYRLYRW----LFTLCP 309
            ||     |....||||..:.:.|..|     .|||:.:|       ..||.|..|    .|.|||
Zfish   271 YF-----YSMCNSGFKDCSMVINAML-----HALTAGKP-------RHRYLLVSWTDLLFFHLCP 318

  Fly   310 TPLVDWLTVRFCAMPTY 326
                        |:|::
Zfish   319 ------------ALPSF 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 86/288 (30%)
adh_short 28..229 CDD:278532 66/215 (31%)
zgc:113142NP_001012506.1 NADB_Rossmann 52..328 CDD:304358 95/329 (29%)
adh_short 52..246 CDD:278532 66/212 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H128397
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.780

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