DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and hsd17b11

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001011304.1 Gene:hsd17b11 / 496757 XenbaseID:XB-GENE-1004190 Length:300 Species:Xenopus tropicalis


Alignment Length:220 Identity:54/220 - (24%)
Similarity:94/220 - (42%) Gaps:29/220 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LGRQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLS 80
            |.|:.:|.:   ||||||...|:|...|....|...:.|:   .:|..:|.:  :.....:.|.:
 Frog    29 LKRKSVKGE---VVLITGAGHGIGKITAQIFGELESVLVL---WDINKQGVE--ETAEKCRKGGA 85

  Fly    81 RMHTLELDLLEPDSIRL----VHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQI 141
            :::|..:|..:.:.|..    |.:::.|:         |.||||||::...:......:|||...
 Frog    86 KVYTYVVDCSKREEINTAANKVKQEVGDV---------TILINNAGIIFCADVLTLQDQQIEKIF 141

  Fly   142 NCNLLGTMRLTHELLP-LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQY 205
            ..|:|.....|...|| :||...|.|:.|.|..|...:..:..|.::|.|...:..:|..||...
 Frog   142 EVNILAHFWTTRAFLPSMLRNNHGHIVTVASSAGFVGVQFMVDYCSTKFAALGYHKALTAELLAL 206

  Fly   206 GMEVVN-------FIPGSFVLDSNI 223
            |...:.       |:...||.:.::
 Frog   207 GKSGIKTSCLCPVFVDTGFVKNPSL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 51/209 (24%)
adh_short 28..229 CDD:278532 51/208 (25%)
hsd17b11NP_001011304.1 17beta-HSDXI-like_SDR_c 38..277 CDD:187598 51/208 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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