DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and hsd17b2

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_005163234.2 Gene:hsd17b2 / 449537 ZFINID:ZDB-GENE-040928-1 Length:381 Species:Danio rerio


Alignment Length:312 Identity:96/312 - (30%)
Similarity:146/312 - (46%) Gaps:40/312 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRM 82
            |..:...:...|||||||||.||.:|... :...|.|.:...:..|.||..|:..||.     .:
Zfish    73 RDVMMTAANKAVLITGCDSGFGHELAQVL-DRAGMRVFAGVLDELSPGALKLKESASV-----NL 131

  Fly    83 HTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVM---CFGEFEWQLTEQIEAQINCN 144
            ..|:||:.....|...|:.::   ::.....|.||:|||||:   |.||.  ...:..::.::.|
Zfish   132 TVLQLDITNNTQITQTHQFIK---SQTDKTGLWALVNNAGVLGYVCDGEI--LPMKMYKSCLDVN 191

  Fly   145 LLGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEV 209
            .||::.:||..|||:||.:||:||:||..|...|.....|.||||||..::.::|.||..:|:.|
Zfish   192 FLGSVMMTHTFLPLIRQSRGRVINITSMAGEVPLVGFAGYGASKAALNIYSGAIRQELSSWGVRV 256

  Fly   210 VNFIPGSFVLDSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRLRNESL 274
            :...||:|  .:||....:|..:...:..|.....:.|:|.|.:...::        .||.:.||
Zfish   257 IIVQPGAF--RTNILGSSEQWERAQEQILSGLSEEVKDSYGEEYIHSMQ--------KRLLDMSL 311

  Fly   275 ---------LAKFKDALTSSQPLALYIEEPRRY---RLYRWLFTLCPTPLVD 314
                     |...|.|:.||.|...|......:   .|||:    |||.|.|
Zfish   312 ASSEDKGPFLQSLKHAILSSNPKHFYYPGAGAWVLSLLYRY----CPTALSD 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 87/287 (30%)
hsd17b2XP_005163234.2 None

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