DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and CG13833

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster


Alignment Length:212 Identity:52/212 - (24%)
Similarity:92/212 - (43%) Gaps:25/212 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VVLITGCDSGLGHSMAV-YCHESLHMTVISCCHNIKSEGA----KLLQGLASAKDGLSRMHTLEL 87
            |.::||...|||.:::: ...:..|:.|:    :|...||    |.:|.:...:....:.:....
  Fly    54 VAVVTGAGHGLGRAISLELAKKGCHIAVV----DINVSGAEDTVKQIQDIYKVRAKAYKANVTNY 114

  Fly    88 DLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGTMRLT 152
            |    |.:.|..:.:.::   .|   :|.|:||||||............::..||.||.......
  Fly   115 D----DLVELNSKVVEEM---GP---VTVLVNNAGVMMHRNMFNPDPADVQLMINVNLTSHFWTK 169

  Fly   153 HELLPLLRQ-QQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVEL---QQYGMEVVNFI 213
            ...||.::: ::|.|:.::|..|:..||....|..:|:.......:||:||   .|..:.|...:
  Fly   170 LVFLPKMKELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMRTLRMELDLENQKDIHVTTVL 234

  Fly   214 PGSFVLDSNIAARQQQH 230
            | || |.:|....|..|
  Fly   235 P-SF-LRTNSDVTQLTH 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 52/212 (25%)
adh_short 28..229 CDD:278532 51/209 (24%)
CG13833NP_651111.1 adh_short 53..241 CDD:278532 49/202 (24%)
NADB_Rossmann 54..297 CDD:304358 52/212 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447496
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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