DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Wwox

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster


Alignment Length:285 Identity:71/285 - (24%)
Similarity:106/285 - (37%) Gaps:60/285 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LITGCDSGLGHSMA-VYCHESLHMTVISCCHNIKSEGA---KLLQGLASAKDGLSRMHTLELDLL 90
            ||||.:.|:|:..| ...|....  :|..|.|..|..|   ::.|...:|:   ||.....||| 
  Fly   125 LITGANCGIGYETARSLAHHGCE--IIFACRNRSSAEAAIERIAQERPAAR---SRCRFAALDL- 183

  Fly    91 EPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGTMRLTHEL 155
              .|:|.|.|.:.:|  |.....:..||.||||  |.....:..:.:|.....:.|....||.:|
  Fly   184 --SSLRSVQRFVEEI--KQSVSHIDYLILNAGV--FALPYTRTVDGLETTFQVSHLSHFYLTLQL 242

  Fly   156 LPLLRQQQGRIINVTSHCGLQA-LPA--LGPYAASKAALRFWT---------------DSLRVEL 202
            ..|. ..:.|||.::|.....| ||.  |..:..|....::|:               ..|....
  Fly   243 ETLF-DYKTRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQELAQRW 306

  Fly   203 QQYGMEVVNFIPGSFV---LDSN--------------IAARQQQHAQKMREAFSAEQHALYDTYF 250
            :|.|:.|.:..||:.|   |..|              ..:.||..|..:..|.:.|...|...||
  Fly   307 KQRGISVFSLHPGNMVSSDLSRNYWFYRLLFAIVRPFTKSLQQAAATSIYCATANELTGLSGLYF 371

  Fly   251 EAFNGYLKVLSGFKPPNRLRNESLL 275
            .  |.:      |..|::|...:.|
  Fly   372 N--NCF------FCEPSKLSKSAAL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 71/285 (25%)
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 71/285 (25%)
Blue background indicates that the domain is not in the aligned region.

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