DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and hsd11b2

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_997885.2 Gene:hsd11b2 / 334098 ZFINID:ZDB-GENE-030131-6030 Length:414 Species:Danio rerio


Alignment Length:311 Identity:95/311 - (30%)
Similarity:146/311 - (46%) Gaps:39/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRM 82
            :..|.|:.: .|.|||||||.|::.|... :::...|.:...|::.||||.|:.:.|     ||:
Zfish    78 KPSLPVEDK-AVFITGCDSGFGNATAKKL-DAMGFEVFATVLNLEGEGAKHLRKVCS-----SRL 135

  Fly    83 HTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMC--FGEFEWQLTEQIEAQINCNL 145
            ..|::|:.:|..   |.:.|.|..||.....|..|:|||| .|  .|:.|..|.......:..|.
Zfish   136 TLLQVDITQPQQ---VQQALLDTKAKLGIRDLWGLVNNAG-WCVNIGDAELSLMSNYRGCMEVNF 196

  Fly   146 LGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVV 210
            .||:.:|...||||||.:|||:.::|..|....|.|..|.||||||..:.::||.||..:|::|.
Zfish   197 FGTVTVTRTFLPLLRQSKGRIVTISSPSGEHPFPCLASYGASKAALNLFINTLRHELDPWGVKVS 261

  Fly   211 NFIPGSFVL--DSNIAARQQQH-------AQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFKPP 266
            ..:|.::..  .||....::|:       :..:.|.:..|.  |.:|. |.|..|.|.       
Zfish   262 TILPSAYKTGQSSNAEYWEKQYKSLLQGLSPNLLEEYGEEY--LLETK-ELFQNYAKT------- 316

  Fly   267 NRLRNESL---LAKFKDALTSSQPLALYIEEPRRYRLYRWLFTLCPTPLVD 314
               .||.|   :....:||.|.||...|...|....:| ::.:..|..:.|
Zfish   317 ---ANEDLSPVIDTIVEALLSPQPQVRYYAGPGLILMY-FICSYLPLSISD 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 90/286 (31%)
adh_short 28..229 CDD:278532 71/204 (35%)
hsd11b2NP_997885.2 type2_17beta_HSD-like_SDR_c 86..366 CDD:187665 93/303 (31%)
adh_short 86..279 CDD:278532 71/203 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 107 1.000 Domainoid score I6462
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1882
SonicParanoid 1 1.000 - - X110
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.910

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