DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and scu

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster


Alignment Length:210 Identity:51/210 - (24%)
Similarity:81/210 - (38%) Gaps:40/210 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLL-------QGLASAKDGLSRMHTL 85
            |.|:||..||||.:.|               ..:..:||.::       :|...||:...::..:
  Fly     6 VSLVTGGASGLGRATA---------------ERLAKQGASVILADLPSSKGNEVAKELGDKVVFV 55

  Fly    86 ELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMC------FGEFEWQLTEQIEAQINCN 144
            .:|:.....:....:     .|||...||...:|.||...      |.:......|..:..||.|
  Fly    56 PVDVTSEKDVSAALQ-----TAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININ 115

  Fly   145 LLGT---MRLTHELL----PLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVEL 202
            .:||   :||:..|:    |....|:|.|:|..|............|:|||||:...|..:..:|
  Fly   116 TVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

  Fly   203 QQYGMEVVNFIPGSF 217
            ...|:.:....||.|
  Fly   181 STQGIRICTIAPGLF 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 51/210 (24%)
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 51/210 (24%)

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