DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and spidey

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster


Alignment Length:272 Identity:65/272 - (23%)
Similarity:127/272 - (46%) Gaps:46/272 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LITGCDSGLGHSMA-VYCHESLHMTVISCCHNIKS-EGAKLLQGLASAKDGLSRMHTLELDLLEP 92
            ::||...|:|.:.| ......|.:.:||     :| |...::......|.|: .:..:::|....
  Fly    56 VVTGSTDGIGKAYAKELARRGLKLVLIS-----RSLEKLNVVAKEIGDKYGV-EVRVIDVDFTGG 114

  Fly    93 DSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQ-------INCNLLGTMR 150
            |.|   :.::|:   |.....:..|:||.|: .:|..|:.| :..:|.       :..|:.....
  Fly   115 DEI---YDKIRE---KTTGLNVGVLVNNVGI-SYGHPEYFL-DCYKADPPFLRNIVAANIHSVTH 171

  Fly   151 LTHELLP-LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIP 214
            :|...|| ::.|::|.||||:|..|:...|.|..|:::||.:..::|.|:.|.:::|:.:.:..|
  Fly   172 MTALFLPGMISQRRGVIINVSSTAGVIPNPLLSVYSSTKAFVNKFSDDLQTEYKEHGILIQSVQP 236

  Fly   215 GSFVLDSNIAARQQQHAQKMREA--FSAEQHALYDTYFEAFNGYLKV---LSGFKPPNRLRNESL 274
            | ||. :|::        |:|:|  |:...    :||..:....|.:   .:|:.|...|:   |
  Fly   237 G-FVA-TNMS--------KIRKASVFAPSP----ETYVRSALSTLGIATQTAGYLPHALLQ---L 284

  Fly   275 LAKFKDALTSSQ 286
            :..|.:|:...|
  Fly   285 VIHFTEAVFGEQ 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 65/272 (24%)
spideyNP_572420.1 17beta-HSD1_like_SDR_c 52..288 CDD:187614 62/262 (24%)

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