DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and CG3603

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster


Alignment Length:209 Identity:48/209 - (22%)
Similarity:88/209 - (42%) Gaps:32/209 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLL---QGLASAKD-----GLSRMHT 84
            |.|:||..||:|.               :.|..:..:|||::   :.|.:|::     |..|...
  Fly    10 VALVTGAGSGIGR---------------ATCRLLARDGAKVIAVDRNLKAAQETVQELGSERSAA 59

  Fly    85 LELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGTM 149
            ||:|:....|::....:......:.|    |.::|:||:...|..........:.....||.||.
  Fly    60 LEVDVSSAQSVQFSVAEALKKFQQAP----TIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTF 120

  Fly   150 RLTHELLPLLRQQQ---GRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVN 211
            .:|......:.:|:   |.|:|::|............|||:||.:..:|:....|..::|:.|..
  Fly   121 LVTQAYAKAMIEQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNC 185

  Fly   212 FIPGSFVLDSNIAA 225
            .:||  .:|:.:.|
  Fly   186 ILPG--YIDTPMVA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 48/209 (23%)
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 48/209 (23%)

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