Protein Alignment sro and Rdh16

DIOPT Version :9

• Sequence 1: NP_651725.1
• Gene: sro / 43512
• FlyBaseID: FBgn0262112
• Length: 335
• Species: Drosophila melanogaster
• Sequence 2: NP_954678.1
• Gene: Rdh16 / 299511
• RGDID: 735050
• Length: 317
• Species: Rattus norvegicus
• Alignment Length: 326
• Identity: 95/326 - (29%)
• Similarity: 149/326 - (45%)
• Gaps: 49/326 - (15%)

  Fly     6 LLRALRRSLGLGRQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQ 70
            |||..|....:...|.|     .|.|||||||.|:.:|... :...|.|::.|  :..:||:.|:
  Rat    14 LLRLFRERKVVSHLQDK-----YVFITGCDSGFGNLLARQL-DRRGMRVLAAC--LTEKGAEQLR 70

  Fly    71 GLASAKDGLSRMHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVM-CFGEFEWQLT 134
            ...|     .|:.|:.||:.:.:||....:.:::.:.   :..|..|:||||:. ..|..||...
  Rat    71 SKTS-----DRLETVILDVTKTESIVAATQWVKERVG---NTGLWGLVNNAGISGHLGPNEWMNK 127

  Fly   135 EQIEAQINCNLLGTMRLTHELLPLLRQQQGRIINVT------SHCGLQALPALGPYAASKAALRF 193
            :.|.:.::.||||.:.:|...:||:|:.:||::||.      |.||       |.|..||..:..
  Rat   128 QNIASVLDVNLLGMIEVTLSTVPLVRKARGRVVNVASIAGRLSFCG-------GGYCISKYGVEA 185

  Fly   194 WTDSLRVELQQYGMEVVNFIPGSFVLDSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLK 258
            ::||||.||..:|::|....||.|..|.........:.|.:.:..|:|...:|...:.|  .|||
  Rat   186 FSDSLRRELSYFGVKVAIVEPGFFRTDVTNGVTLSSNFQMLWDQTSSEVREVYGENYLA--SYLK 248

  Fly   259 VLSGFKPPNRLRNESLLAK--FKDALTSSQPLALYIEEPRRY------RLYRWLFTLCPTPLVDW 315
            :|:|.  ..|...:..|..  .:.||||..|..       ||      :.:....:..||.|||.
  Rat   249 MLNGL--DQRCNKDLSLVTDCMEHALTSCHPRT-------RYSAGWDAKFFYLPMSYLPTFLVDA 304

  Fly   316 L 316
            |
  Rat   305 L 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sro	NP_651725.1	17beta-HSD-like_SDR_c	27..300	CDD:187632	83/287 (29%)
		adh_short	28..229	CDD:278532	64/207 (31%)
Rdh16	NP_954678.1	type2_17beta_HSD-like_SDR_c	30..305	CDD:187665	89/308 (29%)
		adh_short	30..214	CDD:278532	65/206 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D370032at33208
OrthoFinder	1	1.000	-	-		FOG0000161
OrthoInspector	1	1.000	-	-		otm45084
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X110
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.920