DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Hsd17b6

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_038814.1 Gene:Hsd17b6 / 27400 MGIID:1351670 Length:317 Species:Mus musculus


Alignment Length:305 Identity:90/305 - (29%)
Similarity:140/305 - (45%) Gaps:48/305 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMHTLELDLLEPD 93
            |.|||||||.|:.:|... :...|.|::.|  :..:||:.|:...|     .|:.|:.||:.:.:
Mouse    32 VFITGCDSGFGNLLARQL-DRRGMRVLAAC--LTEKGAEELRNKTS-----DRLETVILDVTKTE 88

  Fly    94 SIRLVHRQLRDILAKDPSYRLTALINNAGVM-CFGEFEWQLTEQIEAQINCNLLGTMRLTHELLP 157
            ||....:.:::.:.   ...|..|:|||||: .|...||...|........||:|..::|..:|.
Mouse    89 SIVAATQWVKERVG---DRGLWGLVNNAGVLQPFAYIEWYRPEDYMPIFQVNLIGLTQVTISMLF 150

  Fly   158 LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIPGSFVLDSN 222
            |:::.:|||:||:|..|..||.. |.|:.||..:..::|.||.|:|.:|::|....||||..:..
Mouse   151 LVKKARGRIVNVSSALGRVALFG-GFYSCSKYGVEAFSDVLRHEVQDFGVKVSIIEPGSFKTEMT 214

  Fly   223 IAARQQQHAQKMREAFSAEQH-------ALYDTYFEAFNGYLKVLSGFKPPNRLRNESLLAK-FK 279
            .|....:..:|:.||  |.:|       ..:|.:.......|...|        ||.||:.. .:
Mouse   215 DAELTIERTKKVWEA--APEHIKESYGQQFFDDFCSTTKRELMKCS--------RNLSLVTDCME 269

  Fly   280 DALTSSQPLALYIEE--------PRRYRLYRWLFTLCPTPLVDWL 316
            .||||:.|...|...        |..|         .|..|||:|
Mouse   270 HALTSTHPRTRYSAGWDAKFFFIPLSY---------LPASLVDYL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 85/287 (30%)
Hsd17b6NP_038814.1 Rossmann-fold NAD(P)(+)-binding proteins 30..306 CDD:473865 90/305 (30%)

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