DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and ayr1

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_594548.1 Gene:ayr1 / 2541489 PomBaseID:SPAC23D3.11 Length:296 Species:Schizosaccharomyces pombe


Alignment Length:309 Identity:83/309 - (26%)
Similarity:133/309 - (43%) Gaps:70/309 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VDSRHVVLITGC-DSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAK-----DGLSR 81
            :::...|||||| :.|:|:::|:..|:               ||   .|.||:|:     |.|::
pombe     1 MEAEKFVLITGCSEGGIGNALALKFHQ---------------EG---FQVLATARQVERMDNLTK 47

  Fly    82 --MHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCN 144
              :.||:||:.:.||:|.|.:::|    |..:..|..||||||..|.........|.:...::.|
pombe    48 AGLQTLKLDVTDEDSVREVEQEVR----KFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVN 108

  Fly   145 LLGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEV 209
            ..|.:|:.......|.:.:|.|:||.|............|.||||||..::::||:||..:|::|
pombe   109 FYGVIRMNKAFQHQLIRAKGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGVQV 173

  Fly   210 VNFIPGSFVLDSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRLRNESL 274
            .:.:.|.  :.:.|   |.:....|.||...|....|.        |.|::        |.|.:.
pombe   174 TSIMTGG--VQTKI---QSKPLGTMTEAAIPENSIYYP--------YRKLI--------LENRNP 217

  Fly   275 LAKFKDALTSSQPLALYIEE------PRRYRLYRW--LFTLCPTPLVDW 315
            :.||           :.|||      |:.....||  ||.....|...|
pombe   218 VEKF-----------VTIEEFADAAYPQLVGRGRWYQLFKPGVRPAQIW 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 77/286 (27%)
adh_short 28..229 CDD:278532 62/208 (30%)
ayr1NP_594548.1 17beta-HSD-like_SDR_c 5..261 CDD:187632 83/305 (27%)
adh_short 5..183 CDD:278532 60/201 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X110
TreeFam 1 0.960 - -
54.870

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