DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and SPOM_SPCC162.03

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_588241.1 Gene:SPOM_SPCC162.03 / 2539382 PomBaseID:SPCC162.03 Length:292 Species:Schizosaccharomyces pombe


Alignment Length:233 Identity:66/233 - (28%)
Similarity:106/233 - (45%) Gaps:31/233 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLITGCDSGLGHSMAVYCHESLHMTVISCCH---NIKSEGAKLLQGLASAKDGLSRMHTLELDLL 90
            |||||...|||::: |....:....||:|..   .|..|.:|||:              |:||:.
pombe     8 VLITGSSKGLGYAL-VKVGLAQGYNVIACSRAPDTITIEHSKLLK--------------LKLDVT 57

  Fly    91 EPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGTMRLTHEL 155
            :..|:....:.     ||.....:..:|||||....||||....|::..|:|.|..|...:|.|.
pombe    58 DVKSVETAFKD-----AKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEA 117

  Fly   156 LPLLRQ--QQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQ-QYGMEVVNFIPGSF 217
            |.|:|:  :.|||:.::|..|....|.|..|.|||.|:...:.::..||. .:.:.:....||. 
pombe   118 LNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRELDPNWNIAITIVQPGG- 181

  Fly   218 VLDSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNG 255
             :.:..|:...|.| |...|:  |....:..::|.::|
pombe   182 -MQTEWASSNMQWA-KPHPAY--ENDRSWRPFWENYHG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 66/233 (28%)
SPOM_SPCC162.03NP_588241.1 17beta-HSD-like_SDR_c 7..248 CDD:187632 66/233 (28%)

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