DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Sdr16c6

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001074179.1 Gene:Sdr16c6 / 242286 MGIID:2685269 Length:316 Species:Mus musculus


Alignment Length:190 Identity:48/190 - (25%)
Similarity:80/190 - (42%) Gaps:32/190 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SRHVVLITGCDSGLGHSMAVYCHESLHMTVI-----------SCCHNIKSEGAKLLQGLASAKDG 78
            |..:|||||..||||..:|:  |.:.|...:           ..|..:|.:|.  ::..|...|.
Mouse    35 SGEIVLITGAGSGLGRLLAI--HFASHGATLVLWDINQEGNMETCRLVKQKGD--VKVFAYKCDC 95

  Fly    79 LSRMHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINC 143
            .||:....:    .|.::   .::.|:         |.|||||||:....|.......:|.....
Mouse    96 SSRIEVYRV----ADQVK---EEVGDV---------TILINNAGVVTGKSFLNTPDHLVEKSFLV 144

  Fly   144 NLLGTMRLTHELLP-LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVEL 202
            |.:.........|| :::...|.::.::|..||..:..|..|::||.|...:.:||.:||
Mouse   145 NAISHFWTCKAFLPAMVKANHGHLVCISSIAGLVGINGLSDYSSSKFAAFGFAESLFLEL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 47/188 (25%)
Sdr16c6NP_001074179.1 17beta-HSDXI-like_SDR_c 38..276 CDD:187598 47/187 (25%)

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