DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Rdh16f2

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_663399.2 Gene:Rdh16f2 / 216454 MGIID:3583955 Length:318 Species:Mus musculus


Alignment Length:319 Identity:97/319 - (30%)
Similarity:154/319 - (48%) Gaps:34/319 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLRALRRSLGLGRQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQ 70
            |||..|.     ||.:.......|.||||.||.|:.:|... :...|.|::.|.  |.|||:.|:
Mouse    14 LLRFFRE-----RQVVDHLQDKYVFITGCGSGFGNLLARQL-DRRGMRVLAACR--KEEGAEELR 70

  Fly    71 GLASAKDGLSRMHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGV-MCFGEFEWQLT 134
            ...|     .|:.|:.||:.:.::|....:.:::.:.   :..|..|:||||: :..|..||...
Mouse    71 RKTS-----ERLETVILDVTKTENIVAATQWVKERVG---NRGLWGLVNNAGISVPSGPNEWMKK 127

  Fly   135 EQIEAQINCNLLGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLR 199
            :...:.::.||||.:.:|..:|||:|:.:||::||:|..|..:|...|.|..||..:..::||||
Mouse   128 QDFASVLDVNLLGLIEVTLSMLPLVRKARGRVVNVSSILGRVSLGGSGGYCISKYGIEAFSDSLR 192

  Fly   200 VELQQYGMEVVNFIPGSFVLDSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFK 264
            .||:.:|::|....||.|:.....:||...:.|.:.:..|:|...:|...:.|  .|||.|    
Mouse   193 RELRYFGVKVAIIEPGFFLTGMASSARLCSNIQMLWDQTSSEIREIYGEKYLA--SYLKNL---- 251

  Fly   265 PPNRLRNESLLAKFKDALTSSQPLALYIEEPR-RY------RLYRWLFTLCPTPLVDWL 316
              |.|  :....|....:|.....||....|| ||      :|:....:..||.|||.|
Mouse   252 --NEL--DQRCNKDLSVVTDCMEHALTACHPRTRYSAGWDAKLFFTPLSYLPTFLVDAL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 84/280 (30%)
Rdh16f2NP_663399.2 type2_17beta_HSD-like_SDR_c 30..307 CDD:187665 91/298 (31%)

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