DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Rdh5

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001415711.1 Gene:Rdh5 / 19682 MGIID:1201412 Length:320 Species:Mus musculus


Alignment Length:316 Identity:92/316 - (29%)
Similarity:148/316 - (46%) Gaps:36/316 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRM 82
            ||.|.. |...:.|||||||.|..:|:...:.....:..|   :...||:.||.:||     ||:
Mouse    21 RQSLPA-SDAFIFITGCDSGFGRLLALQLDQKGFQVLAGC---LTPSGAEDLQQMAS-----SRL 76

  Fly    83 HTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVM-CFGEFEWQLTEQIEAQINCNLL 146
            ||..||:.:|.:::.|.:.::..:.:.   .|..|:|||||. ..|...|...:..:..::.|.|
Mouse    77 HTTLLDITDPQNVQQVAKWVKTRVGET---GLFGLVNNAGVAGIIGPTPWLTQDDFQRVLSVNTL 138

  Fly   147 GTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVN 211
            |.:.:|..|||||:|.:||::|:||..|..|... |.|..||..|..::||||.::..:|::|..
Mouse   139 GPIGVTLALLPLLQQARGRVVNITSVLGRIAANG-GGYCVSKFGLEAFSDSLRRDMAPFGVQVSI 202

  Fly   212 FIPGSFVLD-SNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRLRN---E 272
            ..||.|... :|:.:.:    ..::..::....|:...|.|||   |...:..:...|:.|   :
Mouse   203 VEPGFFRTPVTNLESLE----STLKACWARLPPAIQAHYGEAF---LDTSTDLRVQRRIMNLICD 260

  Fly   273 SLLAK----FKDALTSSQPLALYIEEPRRYRLYRWL-FTLCPTPLVD----WLTVR 319
            ..|.|    .:.|||:..|...|  .|.......|| .:..|..:||    |:..|
Mouse   261 PELTKVTSCLEHALTARHPRTRY--SPGWDAKLLWLPASYLPARVVDAVLTWILPR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 81/281 (29%)
Rdh5NP_001415711.1 None

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