DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and drd-5

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_509415.2 Gene:drd-5 / 186315 WormBaseID:WBGene00018885 Length:331 Species:Caenorhabditis elegans


Alignment Length:332 Identity:73/332 - (21%)
Similarity:135/332 - (40%) Gaps:68/332 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KVDS--RHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMHT 84
            :||:  :..|.|:|||||.|..:||               .:..:|..::.|:...::|.|....
 Worm    30 RVDNYGKKTVAISGCDSGFGRLLAV---------------RLVKQGVPVIAGVLKKENGESLKKE 79

  Fly    85 LE---------LDLLEPDSIRLVHRQLRDILAKDPSYR-LTALINNAGVM-CFGEFEWQLTEQIE 138
            :.         |::...:|:    ::...::.|....| |..::.|||:: ..|..:|...:...
 Worm    80 VNTPSLLTFGILNVANDESV----KEFVKLVEKTVENRGLWGVVANAGILGNSGPDDWLSAQDYI 140

  Fly   139 AQINCNLLGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQ 203
            ..:..|..|.||....|...:::|:||::.::|..|....|.:|||..||.|:..:.|.:|.||.
 Worm   141 NTMQVNTFGVMRFIQGLKKFVKKQEGRVVIISSISGRTPRPTVGPYCVSKHAVEAYADVIRHELI 205

  Fly   204 QYGMEVVNFIPGSFVLD------SNIAARQQQHAQKMREAFSAEQHALYDTYFEA-FNGYLKVLS 261
            .:.:.|....||.|..:      :::.|..::...:.::.:..|   .||.|..: |:.......
 Worm   206 DFNVSVHLLEPGFFTTNITQTATNDLDAVWERLDDETKKEYGKE---FYDDYKNSRFSRLSHCAD 267

  Fly   262 GFKPPNRLRNESLLAKFK--------DALTSSQPLALYIEEPRRYRLYRWLFTLCPTPLVDW-LT 317
            ...|.....:.:||.|:.        |.:....|||                || ||...|| ::
 Worm   268 DLNPVIDAYDHALLGKYPKTRYWVGWDTILFYIPLA----------------TL-PTFAQDWFIS 315

  Fly   318 VRFCAMP 324
            .:.|:.|
 Worm   316 FQRCSRP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 63/298 (21%)
drd-5NP_509415.2 Rossmann-fold NAD(P)(+)-binding proteins 37..314 CDD:473865 69/315 (22%)

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