DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and dhs-29

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_509294.1 Gene:dhs-29 / 181027 WormBaseID:WBGene00000992 Length:427 Species:Caenorhabditis elegans


Alignment Length:341 Identity:72/341 - (21%)
Similarity:140/341 - (41%) Gaps:63/341 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LRRSLGLGRQQLKVDSRHVVLITGCDSGLGHSMAV-YCHESLHMTVISCCHNIKSEGAKLLQGLA 73
            :.|.|.|.::.::   ...|:|||..||||.:||: :......:.:|    ::..||        
 Worm    28 IHRFLNLRQKSVQ---GQTVIITGGGSGLGRAMALDFAKRKAKVAII----DVNKEG-------- 77

  Fly    74 SAKDGLSRMHTLE----------LDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGE 128
                ||..:.|:.          .|:.:.|:::...:::.|....     :..:|.||.::.|..
 Worm    78 ----GLETVKTIAAEGNMAKFWYCDISDVDNMKKTAKEIEDTFGD-----VNIVICNAAILSFTS 133

  Fly   129 FEWQLTEQIEAQINCNLLGTMRLTHELLPLLR-QQQGRIINVTSHCGLQALPALGPYAASKAALR 192
            |.....|.:...::.|:.||:......||.:. :..|.|:.|.|..|.........|..||.|:|
 Worm   134 FMEISDELLRKCLDVNIFGTINTIRAFLPKMETKNDGHIVCVCSIAGWSGETMGLSYCTSKFAVR 198

  Fly   193 FWTDSLRVELQQYGMEVVN-------FIPGSFVLDSNIA--------ARQQQHAQKMREAFSAEQ 242
            ...:||::||:..|:|.:.       |.....:|::|:.        ...:..:::|.::...|:
 Worm   199 GAMESLQMELRDRGLEGIKTTTLYPYFARTPMILENNMRPTCTWFPFMSIRSCSKRMVDSILKEK 263

  Fly   243 -HALYDTYFEAFNGYLKVLSGFKPPNRLRNESLLAKFKDALTSSQPLAL-----YIEEPRRYRLY 301
             ||...:|.... .::|.....:....||| .|..|:..:..|...|.|     |.:.|   :|:
 Worm   264 VHAFVPSYITLI-PFVKNFCSLQVCRSLRN-YLGVKYSASDPSFCKLTLIEMSDYYKTP---QLF 323

  Fly   302 RWLFTLCPTPLVDWLT 317
            .||. :.|...:::::
 Worm   324 WWLL-IVPALAINYIS 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 65/305 (21%)
adh_short 28..229 CDD:278532 49/227 (22%)
dhs-29NP_509294.1 adh_short 42..230 CDD:278532 47/208 (23%)
NADB_Rossmann 43..281 CDD:304358 55/259 (21%)
DUF4499 322..416 CDD:291595 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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