DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and dhs-20

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_505941.3 Gene:dhs-20 / 179590 WormBaseID:WBGene00000983 Length:342 Species:Caenorhabditis elegans


Alignment Length:331 Identity:82/331 - (24%)
Similarity:144/331 - (43%) Gaps:68/331 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMHTLELDLLEPD 93
            :||||||:|.|..:|..|.::..:....|   :.:|.||.|:    ::....|:.|:.||:.:.:
 Worm    44 ILITGCDTGFGRELAKKCAKNGFLVFAGC---LTTEAAKTLE----SESANPRLRTVPLDVSKDE 101

  Fly    94 SIRLVHRQLRDILAKDPSYRLTALINNAGVM-CFGEFEWQLTEQIEAQINCNLLGTMRLTHELLP 157
            |:......::..|.   :::|..::||||:. |:|..:|......:..::.|.||.:|:|.....
 Worm   102 SVEKTVEFVKKSLG---NHKLWGVVNNAGIFSCYGPDDWCRMNDYKLALDVNCLGVIRVTQAFKK 163

  Fly   158 LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIPGSF---VL 219
            |::..:|||:.|||..|..:.||.|||..||.....:.|.:|.||..:|::|....||.|   :|
 Worm   164 LVKAAKGRIVTVTSVNGRLSTPAAGPYVVSKFGAAAYMDCIRQELYNFGVKVSILEPGIFRTPLL 228

  Fly   220 DSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRLRNESLLA-------- 276
            |.....::..|.....:..:..:      |.|.|..|..         ::.|::.::        
 Worm   229 DEQAMLKRVDHVWTQIDDETRTE------YGETFKNYFA---------KMWNKTYISMSTTKIHY 278

  Fly   277 ---KFKDALTSSQPLALYIEEPRRYRLY-RW--LFTLCPTPLVDWLTVRFCAMPTY------EST 329
               .:..|||:..|         |:|.| .|  :|...|..|          :||:      .|.
 Worm   279 VVDNYYHALTAKYP---------RHRYYCGWDAIFVYVPLSL----------LPTWWADYVIRSL 324

  Fly   330 NRQEKI 335
            .:||.:
 Worm   325 GKQEVV 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 71/285 (25%)
adh_short 28..229 CDD:278532 60/203 (30%)
dhs-20NP_505941.3 NADB_Rossmann 42..321 CDD:304358 79/320 (25%)
adh_short 42..230 CDD:278532 59/195 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166792
Domainoid 1 1.000 99 1.000 Domainoid score I4444
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1882
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.740

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