DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Hsd17b1

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_034605.1 Gene:Hsd17b1 / 15485 MGIID:105077 Length:344 Species:Mus musculus


Alignment Length:285 Identity:79/285 - (27%)
Similarity:120/285 - (42%) Gaps:35/285 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VVLITGCDSGLGHSMAV--YCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMHTLELDLL 90
            |||||||.||:|..:||  ....|....|.:...::|::| .||:...:.......:..||||:.
Mouse     5 VVLITGCSSGIGMHLAVRLASDRSQSFKVYATLRDLKAQG-PLLEAARTQGCPPGSLEILELDVR 68

  Fly    91 EPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGTMRLTHEL 155
            :..|:......:.:       .|:..|:.|||...||..|......:.|.::.|:|||:|:....
Mouse    69 DSKSVAAAQACVTE-------GRVDVLVCNAGRGLFGPLEAHELNAVGAVLDVNVLGTIRMLQAF 126

  Fly   156 LP-LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIPGSFVL 219
            || :.|:..||::...|..||..||....|.|||.||....:||.:.|..:|:.|      |.: 
Mouse   127 LPDMKRRHSGRVLVTASVGGLMGLPFHEVYCASKFALEGLCESLAILLPLFGVHV------SLI- 184

  Fly   220 DSNIAARQQQHAQKM-------REAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRLRNESLLAK 277
              ...|......:|:       .|...|:...|:..|   ..||.:.||..:.|     |.:...
Mouse   185 --ECGAVHTAFYEKLVGGPGGALERADAQTRHLFAHY---LRGYEQALSEAQDP-----EEVTEL 239

  Fly   278 FKDALTSSQPLALYIEEPRRYRLYR 302
            |..|:.:.||...|....|...|.|
Mouse   240 FLTAMRAPQPALRYFSTNRFLPLAR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 77/281 (27%)
adh_short 28..229 CDD:278532 60/203 (30%)
Hsd17b1NP_034605.1 NADB_Rossmann 4..260 CDD:304358 77/279 (28%)
adh_short 5..192 CDD:278532 60/203 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1882
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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