DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and Rdh9

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_694773.1 Gene:Rdh9 / 103142 MGIID:2143528 Length:317 Species:Mus musculus


Alignment Length:308 Identity:92/308 - (29%)
Similarity:151/308 - (49%) Gaps:44/308 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRMHTLELDLLEPD 93
            |.|||||||.|:.:|... :...|.|::.|  :..:||:.|:...|     .|:.|:.||:.:.:
Mouse    32 VFITGCDSGFGNLLARQL-DRRGMRVLAAC--LTEKGAEELRNKTS-----DRLETVILDVTKTE 88

  Fly    94 SIRLVHRQLRDILAKDPSYRLTALINNAGV-MCFGEFEWQLTEQIEAQINCNLLGTMRLTHELLP 157
            ||....:.:::.:.   :..|..|:||||: :..|..||...:.....::.||||.:.:|..:||
Mouse    89 SIVTATQWVKERVG---NRGLWGLVNNAGISIPSGPNEWMKKQDFAHVLDVNLLGLIEVTLSMLP 150

  Fly   158 LLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIPGSFVLDSN 222
            |:|:.:||:|||.|..|..:|.. |.|..||..:..::||||.||..:|::|....||.|:....
Mouse   151 LVRKARGRVINVASVLGRVSLCG-GAYCISKYGVEAFSDSLRRELSYFGVKVAIIEPGFFLTGVT 214

  Fly   223 IAARQQQHAQKMREAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRL-----RNESLLAK-FKDA 281
            .:||...:.|.:.:..|:|...:|...:.|  .|||.|      |.|     ::.||:.. .:.|
Mouse   215 SSARLCSNTQMLWDQTSSEIREIYGEKYLA--SYLKRL------NELDKRCNKDLSLVTDCMEHA 271

  Fly   282 LTSSQPLALYIEEPRRY------RLYRWLFTLCPTPLVD----WLTVR 319
            ||:..|..       ||      :|:....:..||.|||    |.:::
Mouse   272 LTACHPRT-------RYSAGWDAKLFYLPLSYLPTFLVDALLYWTSLK 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 85/283 (30%)
Rdh9NP_694773.1 type2_17beta_HSD-like_SDR_c 30..306 CDD:187665 91/300 (30%)

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