DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and LOC100498066

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_017947370.1 Gene:LOC100498066 / 100498066 -ID:- Length:314 Species:Xenopus tropicalis


Alignment Length:277 Identity:89/277 - (32%)
Similarity:136/277 - (49%) Gaps:19/277 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQQLKVDSRHVVLITGCDSGLGHSMAVYCH-ESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSR 81
            ||.|:..:...|||||||||.|:..|.... :.||  :::.|  :..:||..|:..||     ||
 Frog    21 RQTLQNLTDKYVLITGCDSGFGNLAAKQLDAKGLH--ILAAC--LTEKGAMDLKKKAS-----SR 76

  Fly    82 MHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAG-VMCFGEFEWQLTEQIEAQINCNL 145
            :.|:.||:.:...:..|...:.:.|.   :..|..|:|||| .......|||..|.....:|.||
 Frog    77 LQTVILDVTDSQKVSAVAEWVANTLG---NKGLWGLVNNAGFAFALAPNEWQRKEDFIMALNVNL 138

  Fly   146 LGTMRLTHELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVV 210
            |||:.:|..|||||||..|||:||:|..|..:... |.|..||..:..::||||.||..:|::|.
 Frog   139 LGTINMTLHLLPLLRQTGGRIVNVSSALGRLSCVG-GGYCISKFGVEAFSDSLRRELDFFGIKVS 202

  Fly   211 NFIPGSFVLDSNIAARQQQHAQKMREAFSAEQHALY-DTYFEAFNGYLKVLSGFKPPNRLRNESL 274
            ...||:||.........:::.:::.|....|....| :.|::.:...::.|.| ....||  ..:
 Frog   203 IIEPGAFVTSMTDFELHKKNLRRLWEDLPIEVKENYGELYYQQYMQSMERLMG-SASKRL--HEV 264

  Fly   275 LAKFKDALTSSQPLALY 291
            ....:.|||:..|...|
 Frog   265 TDCMEHALTAIYPWTRY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 86/268 (32%)
adh_short 28..229 CDD:278532 73/202 (36%)
LOC100498066XP_017947370.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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