DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and bdh1a

DIOPT Version :9

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_002937878.1 Gene:bdh1a / 100495647 XenbaseID:XB-GENE-990740 Length:337 Species:Xenopus tropicalis


Alignment Length:288 Identity:86/288 - (29%)
Similarity:140/288 - (48%) Gaps:24/288 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSE-GAKLLQGLASAKDGLSRMHTLEL 87
            ||: .||:||||||.|.|:|.:.|....:....|....|.| |.|.|..:.|     .||.|::|
 Frog    48 DSK-AVLVTGCDSGFGFSLAKHLHNKGFIVYAGCLFKDKGEAGVKELDSMKS-----DRMRTIQL 106

  Fly    88 DLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLTEQIEAQINCNLLGTMRLT 152
            ::::.|.:......:|:.|. :|...|..::||||:..|||.|:...|..:.....||.||:|:|
 Frog   107 NVVKQDEVDRTVEIIRENLT-NPEKGLWGVVNNAGISTFGEVEFTSMETYKEVAEVNLWGTVRVT 170

  Fly   153 HELLPLLRQQQGRIINVTSHCGLQALPALGPYAASKAALRFWTDSLRVELQQYGMEVVNFIPGSF 217
            ...|||:|:.:||::|::|..|..|.||..||..:|..:..::|.||.|:...|::|....||:|
 Frog   171 KACLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMHPLGVKVSVVEPGNF 235

  Fly   218 VLDSNIAARQQQHA--QKM----REAFSAEQHALYDTYFEAFNGYLKVLSGFKPPNRLRNESLLA 276
            :..:::.:.::..|  .||    .|....:....|      |:..:..::.:..........::.
 Frog   236 IAGTSLYSPEKIKAIGDKMWADLPEVIKNDYGKKY------FDEKIATMNTYCNSGSTDTSEVID 294

  Fly   277 KFKDALTSSQPLALYIEEPRRYRLYRWL 304
            ....|||:|.|...|  .|..|  |.||
 Frog   295 AITHALTASTPYTRY--HPMDY--YWWL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 81/279 (29%)
adh_short 28..229 CDD:278532 67/201 (33%)
bdh1aXP_002937878.1 type2_17beta_HSD-like_SDR_c 50..335 CDD:187665 84/286 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1882
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.040

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