DRSC/TRiP Functional Genomics Resources

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Protein Alignment sro and cse1l

DIOPT Version :10

Sequence 1:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_012827002.1 Gene:cse1l / 100158534 XenbaseID:XB-GENE-5802331 Length:1007 Species:Xenopus tropicalis


Alignment Length:104 Identity:25/104 - (24%)
Similarity:37/104 - (35%) Gaps:22/104 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LLQGLASAKDGLSRMHTLELDLLEPDSIRLVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQ 132
            |.:||......||....|....|...:::.:...|:..|..||:.|..|              .:
 Frog    17 LSRGLWGEGPALSCQTDLVTMELSEANLQGLTEYLKKTLDPDPAVRRPA--------------EK 67

  Fly   133 LTEQIEAQINCNLLGTMRLTHELLPLLRQQQGRIINVTS 171
            ..|.:|...|..||        ||.|:.:.|..:|.|.|
 Frog    68 YLESVEGNQNYPLL--------LLTLVERSQDNVIKVCS 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 25/104 (24%)
cse1lXP_012827002.1 IBN_N 65..138 CDD:197981 13/56 (23%)
Cse1 192..562 CDD:430038
CAS_CSE1 563..998 CDD:367469
Blue background indicates that the domain is not in the aligned region.

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