DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsyngamma and ATPC2

DIOPT Version :9

Sequence 1:NP_524550.1 Gene:ATPsyngamma / 43507 FlyBaseID:FBgn0020235 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_173022.1 Gene:ATPC2 / 838139 AraportID:AT1G15700 Length:386 Species:Arabidopsis thaliana


Alignment Length:329 Identity:103/329 - (31%)
Similarity:149/329 - (45%) Gaps:65/329 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARP---------YGIGAQQFFEKTE 82
            |.::.:..|:.||||.||||::|::|:||:..||:..:...||         |.|......|..:
plant    61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDID 125

  Fly    83 IQPDEKAEPKK--LLIAVTSDRGLCGAVHTGV---ARLIRGELAQDEANTKVFCVGDKSRAILSR 142
            . |.....|.|  .|:.||.|:||||..:..|   |.|...||.|...:..|..||.|..|..||
plant   126 F-PLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVGKKGNAYFSR 189

  Fly   143 L----YGKNILMVANEVGRLPPTFLDASKIANEV--LQTGYDYTEGKIVYNRFKSVVSYQ---CS 198
            .    ..|.|     |.|.:.||..:|..||::|  |....:..:.::||.:|.|:|...   .:
plant   190 RDEFDVDKCI-----EGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHT 249

  Fly   199 TLPI--------FSGSTVE-----------KSEKLAV-----------------YDSLDSDVVKS 227
            .||:        ..|..|:           |..||||                 ::.....::.:
plant   250 LLPLSMKGESCDVKGECVDAIEDEMFRLTSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDA 314

  Fly   228 YLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISG 292
            .:...|.|.|...::|...||.:|||.||.||:.||.|:...||:.:||.|||.||.||:||::|
plant   315 MMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAG 379

  Fly   293 AAAL 296
            |.||
plant   380 AEAL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsyngammaNP_524550.1 F1-ATPase_gamma 27..293 CDD:213394 99/324 (31%)
ATPC2NP_173022.1 ATP-synt 64..383 CDD:376304 100/324 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0224
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54014
OrthoDB 1 1.010 - - D841252at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100847
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.690

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