DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsyngamma and ATPC1

DIOPT Version :9

Sequence 1:NP_524550.1 Gene:ATPsyngamma / 43507 FlyBaseID:FBgn0020235 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_567265.1 Gene:ATPC1 / 825797 AraportID:AT4G04640 Length:373 Species:Arabidopsis thaliana


Alignment Length:335 Identity:98/335 - (29%)
Similarity:156/335 - (46%) Gaps:80/335 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARP---------YGIGAQQFFEKTE 82
            |:|:.:..|:.||||.||||::||:|:|||..||:..:...||         |.|..|...:..:
plant    51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVD 115

  Fly    83 IQPDEKAEP--KKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEANTK----------VFCVGDK 135
            : |..|..|  |..|:.||.||||||..:..:       :.:.||..|          |..||.|
plant   116 V-PLTKVRPVKKVALVVVTGDRGLCGGFNNFI-------IKKAEARIKELKGLGLEYTVISVGKK 172

  Fly   136 SRA-ILSRLY---GKNILMVANEVGRLPPTFLDASKIANEV--LQTGYDYTEGKIVYNRFKSVVS 194
            ..: .|.|.|   .|.:     |.|.| ||..:|..:|::|  |....:..:.:::|.:|.|:|.
plant   173 GNSYFLRRPYIPVDKYL-----EAGTL-PTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVK 231

  Fly   195 YQ---CSTLPI--------FSGSTVEKSE-----------KLAV-----------------YDSL 220
            .:   .:.||:        .:|:.|:.:|           ||.|                 ::..
plant   232 SEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQD 296

  Fly   221 DSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRE 285
            ...::.:.|...|.|.|...::|...||.::||:||.:||.||.::...|::.:||.|||.||.|
plant   297 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGE 361

  Fly   286 LIEIISGAAA 295
            ::||::||.|
plant   362 ILEIVAGANA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsyngammaNP_524550.1 F1-ATPase_gamma 27..293 CDD:213394 95/331 (29%)
ATPC1NP_567265.1 ATPsyn_F1gamma 51..371 CDD:273469 97/333 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0224
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54014
OrthoDB 1 1.010 - - D841252at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100847
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.690

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