DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsyngamma and ATP3

DIOPT Version :9

Sequence 1:NP_524550.1 Gene:ATPsyngamma / 43507 FlyBaseID:FBgn0020235 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_180863.1 Gene:ATP3 / 817866 AraportID:AT2G33040 Length:325 Species:Arabidopsis thaliana


Alignment Length:320 Identity:112/320 - (35%)
Similarity:184/320 - (57%) Gaps:43/320 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLP-------LAMEATMLAQQQRGMATLKMISI-----RLKSVKNIQKITQSMKMVSAAK----Y 57
            |||       .|:.:.:.:.|:.|:..::.||.     |:||||||||||::||||:|:|    .
plant    13 LLPSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQ 77

  Fly    58 ARAERDLKAARPYGIGAQQFFEKTEIQPDEKA--EPKKLLIAVTSDRGLCGAVHTGVARLIRGEL 120
            .|||......:|:          |.:..|..:  ..|.:::.::||:||||.:::.|.::.|...
plant    78 GRAENSRGLWQPF----------TALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALY 132

  Fly   121 ---AQDEANTKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEG 182
               |..|...:...||:|::||:.|....:|::...|:.:.|..:...|.:|:::|: ..::...
plant   133 KLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILK-NVEFDAL 196

  Fly   183 KIVYNRFKSVVSYQCSTLPIFSGSTVEKSE----KLAVYDSLD-------SDVVKSYLEFSLASL 236
            :||||:|.|||::..:...:.|...:||..    ||...||.:       .:::::..||..:.:
plant   197 RIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCV 261

  Fly   237 IFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296
            :|..:.|.||||..:||:|||::|:|||||:|:||||:||||||.||.|||||||||:||
plant   262 MFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsyngammaNP_524550.1 F1-ATPase_gamma 27..293 CDD:213394 102/290 (35%)
ATP3NP_180863.1 ATPsyn_F1gamma 44..321 CDD:273469 103/287 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 165 1.000 Domainoid score I1207
eggNOG 1 0.900 - - E1_COG0224
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3792
Inparanoid 1 1.050 170 1.000 Inparanoid score I1553
OMA 1 1.010 - - QHG54014
OrthoDB 1 1.010 - - D841252at2759
OrthoFinder 1 1.000 - - FOG0004011
OrthoInspector 1 1.000 - - oto4174
orthoMCL 1 0.900 - - OOG6_100847
Panther 1 1.100 - - LDO PTHR11693
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3294
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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