DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsyngamma and ATP5F1C

DIOPT Version :9

Sequence 1:NP_524550.1 Gene:ATPsyngamma / 43507 FlyBaseID:FBgn0020235 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001001973.1 Gene:ATP5F1C / 509 HGNCID:833 Length:298 Species:Homo sapiens


Alignment Length:279 Identity:164/279 - (58%)
Similarity:218/279 - (78%) Gaps:6/279 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQQFFEKTEIQ-P 85
            |.|.|||||.|:.||||:|||||||:|||||:|||||||||:||.||.||:|:...:||.:|: |
Human    21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGP 85

  Fly    86 DEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEANTK---VFCVGDKSRAILSRLYGKN 147
            ::|  .|.|||.|:||||||||:|:.:|:.::.|:|...|..|   :..:|||.|.||.|.:...
Human    86 EDK--KKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQ 148

  Fly   148 ILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSE 212
            .|:...||||.||||.|||.||.|:|.:||::.||.|::|:|:||:||:....||||.:||..::
Human   149 FLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVASAD 213

  Fly   213 KLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRT 277
            .:::||.:|:||:::|.|::||::|:|::||...||||:||||||||||||.|||||||||||||
Human   214 SMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRT 278

  Fly   278 RQAVITRELIEIISGAAAL 296
            ||||||:||||||||||||
Human   279 RQAVITKELIEIISGAAAL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsyngammaNP_524550.1 F1-ATPase_gamma 27..293 CDD:213394 156/269 (58%)
ATP5F1CNP_001001973.1 ATPsyn_F1gamma 26..297 CDD:273469 159/272 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157599
Domainoid 1 1.000 305 1.000 Domainoid score I1365
eggNOG 1 0.900 - - E1_COG0224
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3792
Inparanoid 1 1.050 312 1.000 Inparanoid score I2590
Isobase 1 0.950 - 0 Normalized mean entropy S748
OMA 1 1.010 - - QHG54014
OrthoDB 1 1.010 - - D518450at33208
OrthoFinder 1 1.000 - - FOG0004011
OrthoInspector 1 1.000 - - oto90014
orthoMCL 1 0.900 - - OOG6_100847
Panther 1 1.100 - - LDO PTHR11693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R120
SonicParanoid 1 1.000 - - X3294
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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