DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsyngamma and Y69A2AR.18

DIOPT Version :9

Sequence 1:NP_524550.1 Gene:ATPsyngamma / 43507 FlyBaseID:FBgn0020235 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_500214.1 Gene:Y69A2AR.18 / 177038 WormBaseID:WBGene00022089 Length:299 Species:Caenorhabditis elegans


Alignment Length:300 Identity:176/300 - (58%)
Similarity:221/300 - (73%) Gaps:6/300 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MMQRTQLLLPLAMEATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKA 66
            |:::....|.|..:....|:|.||.||||.|||||||||||||||:|||||:|||||:|||:||.
 Worm     1 MLRQGAGTLQLVSQGFANAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKG 65

  Fly    67 ARPYGIGAQQFFEKTE--IQPDEKAEPKK-LLIAVTSDRGLCGAVHTGVARLIRGEL--AQDEAN 126
            ||.||:||:.||:..:  ::..||.|.|| :|:.:||||||||.||:.:.:..:..|  |.|: .
 Worm    66 ARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDK-E 129

  Fly   127 TKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKS 191
            .:|..:||||||.|.|||..:||:..||:||.||:|.|||..|..:|.:|||:..|.|::||||:
 Worm   130 IRVVAIGDKSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKT 194

  Fly   192 VVSYQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAM 256
            ||||:.|.|.|.....::..|.|:.|||:|.||::||.|:|||.||:|.|||.|.||||||||||
 Worm   195 VVSYETSKLQILPLEAIKAKEALSTYDSVDDDVLQSYSEYSLAQLIYYGMKESATSEQSSRMTAM 259

  Fly   257 DNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296
            |.||||||||||||||.|||||||||||||||||||||.:
 Worm   260 DGASKNAGEMIDKLTLAFNRTRQAVITRELIEIISGAACV 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsyngammaNP_524550.1 F1-ATPase_gamma 27..293 CDD:213394 166/270 (61%)
Y69A2AR.18NP_500214.1 F1-ATPase_gamma 26..296 CDD:213394 166/270 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165663
Domainoid 1 1.000 311 1.000 Domainoid score I718
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3792
Inparanoid 1 1.050 322 1.000 Inparanoid score I1481
Isobase 1 0.950 - 0 Normalized mean entropy S748
OMA 1 1.010 - - QHG54014
OrthoDB 1 1.010 - - D518450at33208
OrthoFinder 1 1.000 - - FOG0004011
OrthoInspector 1 1.000 - - oto18828
orthoMCL 1 0.900 - - OOG6_100847
Panther 1 1.100 - - LDO PTHR11693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R120
SonicParanoid 1 1.000 - - X3294
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

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