DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS11 and SYC1

DIOPT Version :10

Sequence 1:NP_651721.1 Gene:IntS11 / 43506 FlyBaseID:FBgn0039691 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_014822.1 Gene:SYC1 / 854351 SGDID:S000005705 Length:188 Species:Saccharomyces cerevisiae


Alignment Length:100 Identity:17/100 - (17%)
Similarity:40/100 - (40%) Gaps:32/100 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 RFTSKVKMDDSGP---------VIRTSERLKTLLEEKLAGWTVTMQENGS--IAIESVEVKVEED 565
            |...::.:::||.         :::|...::|           |..||.:  :.:..|||::   
Yeast    10 RTHQRINLNNSGTDRTNDLYLHIVQTFGCIET-----------TATENATKLLMLGDVEVEI--- 60

  Fly   566 EKDPKQKNILISWTNQ---DEDIGAYILNVLQNMC 597
                ...::.|.||.:   .:.|...|:.::..:|
Yeast    61 ----SASSVSIEWTQKSMISQTIADSIVIMIIGLC 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS11NP_651721.1 YSH1 5..416 CDD:440849
INTS11-like_MBL-fold 6..204 CDD:293849
SYC1NP_014822.1 CPSF73-100_C <28..186 CDD:472439 13/81 (16%)
Blue background indicates that the domain is not in the aligned region.

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