DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS11 and ysh1

DIOPT Version :9

Sequence 1:NP_651721.1 Gene:IntS11 / 43506 FlyBaseID:FBgn0039691 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_594263.2 Gene:ysh1 / 2542258 PomBaseID:SPAC17G6.16c Length:757 Species:Schizosaccharomyces pombe


Alignment Length:642 Identity:200/642 - (31%)
Similarity:319/642 - (49%) Gaps:82/642 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LGAGQDVGRSCLLLSMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSHIDCVIISHFHLDH 73
            ||||.:|||||.::...||.:|||.|:|..|......|.|...     ..|.:|.::||||||||
pombe    24 LGAGNEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEF-----DLSTVDVLLISHFHLDH 83

  Fly    74 CGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVERKG-ESNFFTTQMIKDCMKKVIPVT 137
            ..:|||:.:...:.|.::|||||||:...||.|.  |.|...| |...:..:.:.....::..|.
pombe    84 VASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDY--VKVSNVGMEDQLYDEKDLLAAFDRIEAVD 146

  Fly   138 LHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLIS 202
            .|.::.|: .::...|:|||||||.|:::::...::::||||:...||||..|.:...|||:||:
pombe   147 YHSTIEVE-GIKFTPYHAGHVLGACMYFVEMAGVNILFTGDYSREEDRHLHVAEVPPKRPDVLIT 210

  Fly   203 ESTYATTIRDSKRCRERDFLKKVHECVAKGGKVLIPVFALGRAQELCILLETYW-ERMNLK-YPI 265
            ||||.|.....:..:|...|..:|..:..||:||:|||||||||||.::|:.|| ..::|: .||
pombe   211 ESTYGTASHQPRLEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRSVPI 275

  Fly   266 YFALGLTEKANTYYKMFITWTNQKIRKTFVHRNMFDFKHIKPF-DKAYIDNPGAMVVFATPGMLH 329
            |:|..|..|....::.::...|..|||.|..||.|.|:.:|.. :....|:.|..|:.|:||||.
pombe   276 YYASSLARKCMAIFQTYVNMMNDNIRKIFAERNPFIFRFVKSLRNLEKFDDIGPSVILASPGMLQ 340

  Fly   330 AGLSLQIFKKWAPNENNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHAD 394
            .|:|..:.::|||:..|.:::.||.|:||:..:|.....::...:.|.:..:||||.:||:||.|
pombe   341 NGVSRTLLERWAPDPRNTLLLTGYSVEGTMAKQITNEPIEIVSLSGQKIPRRMAVEELSFAAHVD 405

  Fly   395 AKGIMQLIQNCEPKNVMLVHGEAGKMKFLRSKIKDEF-----NLETYMPANGETCVISTPVKIPV 454
            .....:.|......:::|||||...|..|:|.:..:|     :::.|.|.|   ||   |:.:|.
pombe   406 YLQNSEFIDLVNADHIILVHGEQTNMGRLKSALASKFHNRKVDVKVYTPRN---CV---PLYLPF 464

  Fly   455 DASVSLLKAEARSYNAQPPDPKRRRLIHGVLVMKD--NRIM----LQNLTDALKEIGINRHVMRF 513
            ... .|::|..:   .....||...::.|:|:.||  .::|    |::.:|....:...:.|:.|
pombe   465 KGE-RLVRALGK---VAVHKPKEGDIMSGILIQKDANYKLMSAEDLRDFSDLTTTVLTQKQVIPF 525

  Fly   514 -------------------TSKVKMDDSGPVIRTSERLKTLLEEKLA-GWTVTMQENGSIA---- 554
                               .||.|.......:..:..|..:.|.||| .|...:. |.:||    
pombe   526 FSSMELANFHLKQMFGYVKQSKTKAGQPQYTVMDAITLTLIQEHKLALEWVGNIM-NDTIADSVI 589

  Fly   555 -----IES--VEVKVEED---------EKDPKQKNILISWTNQDEDIGAYILNVLQN 595
                 |||  ..||:...         :|.||        .:::||....::..|.|
pombe   590 TILLGIESSPASVKLTSHKCNHLHSHLDKPPK--------VSKEEDRIKKLMMFLDN 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS11NP_651721.1 YSH1 4..446 CDD:224157 160/445 (36%)
INTS11-like_MBL-fold 6..204 CDD:293849 73/195 (37%)
Beta-Casp 245..363 CDD:214983 43/120 (36%)
RMMBL 376..416 CDD:284853 14/39 (36%)
ysh1NP_594263.2 YSH1 19..462 CDD:224157 162/451 (36%)
CPSF3-like_MBL-fold 19..212 CDD:293850 73/195 (37%)
Beta-Casp 253..374 CDD:214983 43/120 (36%)
RMMBL 387..427 CDD:284853 14/39 (36%)
CPSF73-100_C 484..650 CDD:288554 33/164 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1236
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53735
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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