DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS11 and Cpsf73

DIOPT Version :10

Sequence 1:NP_651721.1 Gene:IntS11 / 43506 FlyBaseID:FBgn0039691 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_321933.6 Gene:Cpsf73 / 1281946 VectorBaseID:AGAMI1_008254 Length:690 Species:Anopheles gambiae


Alignment Length:576 Identity:215/576 - (37%)
Similarity:311/576 - (53%) Gaps:54/576 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITPLGAGQDVGRSCLLLSMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSHIDCVIISHFH 70
            |.||||||:|||||::|...||.||||||:|.|.:.....|....|..:     .||.:.|||||
Mosquito    22 IRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLIDAD-----QIDLLFISHFH 81

  Fly    71 LDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTTQM------IKDC 129
            ||||||||:..:...:.|..:|||.||||...:|.|..||       ||..|.||      ::..
Mosquito    82 LDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKV-------SNISTDQMLYTEADLEAS 139

  Fly   130 MKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDK 194
            |:|:..:..|:...: ..:...||.||||||||||.|::....|:||||::...||||.||.|..
Mosquito   140 MEKIETINFHEERDI-LGVRFWAYNAGHVLGAAMFMIEIAGIRVLYTGDFSRQEDRHLMAAEIPA 203

  Fly   195 CRPDLLISESTYATTIRDSKRCRERDFLKKVHECVAKGGKVLIPVFALGRAQELCILLETYW-ER 258
            .|||:||:||||.|.|.:.:..||..|...|.:.|.:||:.|||||||||||||.::|:.|| :.
Mosquito   204 MRPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILDEYWSQN 268

  Fly   259 MNL-KYPIYFALGLTEKANTYYKMFITWTNQKIRKTFVHRNMFDFK---HIKPFDKAYIDNPGAM 319
            .:| :.|||:|..|.:|....|:.:|...|.|||:.....|.|.|:   ::|..|  :.|:.|..
Mosquito   269 PDLQEIPIYYASSLAKKCMAVYQTYINAMNDKIRRQIAINNPFVFRFISNLKGID--HFDDVGPC 331

  Fly   320 VVFATPGMLHAGLSLQIFKKWAPNENNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAV 384
            ||.|:|||:.:|||.::|:.|..:..|.||:.||||:||:...||...:::...|.|.:.:.|:|
Mosquito   332 VVMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKTILFEPEEITSMNGQKLPLNMSV 396

  Fly   385 EYMSFSAHADAKGIMQLIQNCEPKNVMLVHGEAGKMKFLRSKIKDEF------NLETYMPANGET 443
            :|:|||||.|.:...:.|:..:|.:|:|||||..:|..|:|.:..|:      .:..:.|.|   
Mosquito   397 DYISFSAHTDYQQTSEFIRLLQPTHVVLVHGEQNEMGRLKSALMREYEANPKVQITFHNPRN--- 458

  Fly   444 CVISTPVKIPVDASVSLLKAEARSYNAQPPDPKRRRLIHGVLVMKDNRIMLQNLTDALKEIGINR 508
               :.||::..... ...|........:|.|.:|   :.||||.::.:..|...||..|...::.
Mosquito   459 ---TQPVELYFRGE-KTAKVMGTLAVGEPADCQR---LSGVLVKREFKYHLLAPTDLSKYTDMSM 516

  Fly   509 HVMRFTSKVKMDDSGPVIRTSERLKTLLEEKLAGWTVTMQE----NGSIAIESVEV 560
            .::  |.|..:...|..:    .||.|||.  ||...::.|    .||.|...:.|
Mosquito   517 SIV--TQKQSIHWPGSTV----VLKLLLER--AGGPGSVVETPIPEGSTATARLRV 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS11NP_651721.1 YSH1 5..416 CDD:440849 178/420 (42%)
INTS11-like_MBL-fold 6..204 CDD:293849 90/203 (44%)
Cpsf73XP_321933.6 None

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